| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965379
Identifier: 123965379
GI number: 123965379
Start: 133954
End: 134310
Strand: Reverse
Name: 123965379
Synonym: P9515_01441
Alternate gene names: NA
Gene position: 134310-133954 (Counterclockwise)
Preceding gene: 123965380
Following gene: 123965378
Centisome position: 7.88
GC content: 31.93
Gene sequence:
>357_bases ATGGATAGTGCTGTTGATAAACTTTCGATTCTTCAAGAGAGCGTAAACGCTTTCTTTATAAAATTTTTTGATGGAATGTA TCCAGAAAAAGTAGATAGAGATCCTGATTTAGTTAAGTTAAAACGAATTGGTGCTCTCAACCAATTCAAAGGAATTGATA AGGATTACTCTGATGTTGATATTAAAATGGATATCACAAAAGCATTCACTAATATCATTGAACACGGTGATGGAGTTGCA ATGCTTCAGGAAGAAAATGTCCCATTTGAGGAGAGTATTGAAAGATTAGTTTTGGAAGAACTTACAAATACTGAAAATGG ATATGGATATGATTTCAATGATGATATGGAATATTAG
Upstream 100 bases:
>100_bases AATTAACTAATTTATTAAAGTTATCGAATCCACCCTTACAAAATTAATTGACAAGTTCTTTAAAATGATAAAAATGGTTT AGGAAATCCAAAGAATTATT
Downstream 100 bases:
>100_bases ATCAATGGTTCAAAGAATTGTTAGACAAGAGGTGGCAGTATGAAAAAAGAGAATAATTATGCAGGGGGACTATCTAATTA CATCGTTTTGAAGGGAAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MDSAVDKLSILQESVNAFFIKFFDGMYPEKVDRDPDLVKLKRIGALNQFKGIDKDYSDVDIKMDITKAFTNIIEHGDGVA MLQEENVPFEESIERLVLEELTNTENGYGYDFNDDMEY
Sequences:
>Translated_118_residues MDSAVDKLSILQESVNAFFIKFFDGMYPEKVDRDPDLVKLKRIGALNQFKGIDKDYSDVDIKMDITKAFTNIIEHGDGVA MLQEENVPFEESIERLVLEELTNTENGYGYDFNDDMEY >Mature_118_residues MDSAVDKLSILQESVNAFFIKFFDGMYPEKVDRDPDLVKLKRIGALNQFKGIDKDYSDVDIKMDITKAFTNIIEHGDGVA MLQEENVPFEESIERLVLEELTNTENGYGYDFNDDMEY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13601; Mature: 13601
Theoretical pI: Translated: 3.98; Mature: 3.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSAVDKLSILQESVNAFFIKFFDGMYPEKVDRDPDLVKLKRIGALNQFKGIDKDYSDVD CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHCCHHHHCCCCCCCCCCE IKMDITKAFTNIIEHGDGVAMLQEENVPFEESIERLVLEELTNTENGYGYDFNDDMEY EEEHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MDSAVDKLSILQESVNAFFIKFFDGMYPEKVDRDPDLVKLKRIGALNQFKGIDKDYSDVD CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHCCHHHHCCCCCCCCCCE IKMDITKAFTNIIEHGDGVAMLQEENVPFEESIERLVLEELTNTENGYGYDFNDDMEY EEEHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA