Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

Click here to switch to the map view.

The map label for this gene is 123965363

Identifier: 123965363

GI number: 123965363

Start: 124082

End: 124552

Strand: Reverse

Name: 123965363

Synonym: P9515_01281

Alternate gene names: NA

Gene position: 124552-124082 (Counterclockwise)

Preceding gene: 123965364

Following gene: 123965359

Centisome position: 7.31

GC content: 32.48

Gene sequence:

>471_bases
ATGGGTACTTGGCTTAAGCATGATGTAATTACAACTGTAAATGCGCCATTAGATAACGTTTGGAATACATGGAGTGATTT
AGACTCCATGTCACTCTGGATGAGCTGGATTGAATCCGTGAAAACAGTTGATCAAGAAACATCTACTTTACCTGATTTAA
CTGAATGGACTTTAGCTGCTAATGGATTCAAATTTAAATGGAAAGCACAGATAACAGAAAGGATAGAGAAAAATAAATTA
AAATGGAAATCTATAGGAGGATTACCAACTCAAGGATCTGTTATTTTCGAATCAAAAGGAGACAAATTTACCTCAGTAAA
CTTAGCTGTTACCTATGAATTACCTAAAATGCTTGCTCGCTTTATGGAAGAAAAAATCTTAGGCAAAATGGTAACTAATG
AATTACAAGCAAATATTGATAGATTTCGAGATCTGGTAGAAAAAAATTACAAAAATGAATTAACTAACTAA

Upstream 100 bases:

>100_bases
TAGATTCAATGGAGGGGGCTACTATGAGCGGTCATCTAGCAGCAGCAGCAATTCTAGATAAGAAAGTCGAATTGGCAAAA
AATCGTGCGGTTAGTTAACT

Downstream 100 bases:

>100_bases
AAATATCAATAGCAGCATCTAATAATCCTTCAAAGGTATATTTCACTGCCTCTCCGTCAACTCTGCCAAAAAATTTTTCA
CATATTTTTGAAGTTTGAGG

Product: putative integral membrane protein

Products: NA

Alternate protein names: Integral Membrane Protein; Streptomyces Cyclase/Dehydrase Superfamily; Involved In Polyketide Synthesis; Streptomyces Cyclase/Dehydrase; Polyketide Cyclase / Dehydrase Family Protein

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MGTWLKHDVITTVNAPLDNVWNTWSDLDSMSLWMSWIESVKTVDQETSTLPDLTEWTLAANGFKFKWKAQITERIEKNKL
KWKSIGGLPTQGSVIFESKGDKFTSVNLAVTYELPKMLARFMEEKILGKMVTNELQANIDRFRDLVEKNYKNELTN

Sequences:

>Translated_156_residues
MGTWLKHDVITTVNAPLDNVWNTWSDLDSMSLWMSWIESVKTVDQETSTLPDLTEWTLAANGFKFKWKAQITERIEKNKL
KWKSIGGLPTQGSVIFESKGDKFTSVNLAVTYELPKMLARFMEEKILGKMVTNELQANIDRFRDLVEKNYKNELTN
>Mature_155_residues
GTWLKHDVITTVNAPLDNVWNTWSDLDSMSLWMSWIESVKTVDQETSTLPDLTEWTLAANGFKFKWKAQITERIEKNKLK
WKSIGGLPTQGSVIFESKGDKFTSVNLAVTYELPKMLARFMEEKILGKMVTNELQANIDRFRDLVEKNYKNELTN

Specific function: Unknown

COG id: COG5637

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18050; Mature: 17919

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTWLKHDVITTVNAPLDNVWNTWSDLDSMSLWMSWIESVKTVDQETSTLPDLTEWTLAA
CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHC
NGFKFKWKAQITERIEKNKLKWKSIGGLPTQGSVIFESKGDKFTSVNLAVTYELPKMLAR
CCCEEEHHHHHHHHHHHHCCCHHHCCCCCCCCCEEEECCCCEEEEEEEEEEEHHHHHHHH
FMEEKILGKMVTNELQANIDRFRDLVEKNYKNELTN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GTWLKHDVITTVNAPLDNVWNTWSDLDSMSLWMSWIESVKTVDQETSTLPDLTEWTLAA
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHC
NGFKFKWKAQITERIEKNKLKWKSIGGLPTQGSVIFESKGDKFTSVNLAVTYELPKMLAR
CCCEEEHHHHHHHHHHHHCCCHHHCCCCCCCCCEEEECCCCEEEEEEEEEEEHHHHHHHH
FMEEKILGKMVTNELQANIDRFRDLVEKNYKNELTN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA