| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965352
Identifier: 123965352
GI number: 123965352
Start: 117596
End: 118762
Strand: Reverse
Name: 123965352
Synonym: P9515_01171
Alternate gene names: NA
Gene position: 118762-117596 (Counterclockwise)
Preceding gene: 123965353
Following gene: 123965351
Centisome position: 6.97
GC content: 27.76
Gene sequence:
>1167_bases ATGAATCATATTGAGCACAAAGTTGAAATTAAACTATCTATTCAAGAAATAAATAAAAAAACTTGGAATGAATTAAGAAA AGAAATTAATAACCCATTTTATGAATGGGAATGGCTCTATAACCTTGAATTATCGAAAAGTGTTTCAAGAGAAACTGGAT GGCAACCTTTATATTTTGTTGCTTATCAAAATGAACAAATTTGCGGAATAGCTCCACTTTTTCTTAAAAATCATAGTTAC GGAGAATTTATTTTTGATCAATCCTTTGCAAGATTAGCTCAAGATTTAAATTTGAATTATTATCCTAAGCTAATTGGGAT GAGTCCTTATAGTCCTATTAATGGATATGAATTTCTATACAAAGAGACTAAAAACAAAGCGCCGATTACAAATTCATTAA TCAAACATATTGATAACTTTGCTTTAAAAAATAATATCTTAAGTTGCAATTTTTTATACGTAAACGAAAATTGGGGCAAA CATCTCAAATCCTTAGGATATAAAGAATGGATCAATACAAGTAGTGAATGGAAAACTAATGGAGAAAAATCATTTGATGA TTTCTTATTAAGGTTCAACTCTAATCAAAGAAAAAATATCAAAAAAGAAAGAAAATCAATTTCAAAACAAAATCTCGAGA TTAAAATTCATACAGAAGAGAGTATAAATCTTGAAATAGTTCAAAAAATGCATAATTTCTACGAACAACATTGTTTGAGA TGGGGAGTATGGGGCAGCAAATATCTCACATCCGAGTTTTTCGAAAAAATTCTTGAAAACAAACAAAATCTATTATTTTT TAGTGCTTCAAGAAATGATTCTGAAAGAACAATTGCAATGTCAATGTGTGTGAAAAATAAAAAAAATATTTGGGGTAGAT ATTGGGGTAGTCAAGAAGAAATACTTAACTTACATTTTGAATTATGCTATTACCAACCTATTGAGTGGGCCATAACAAAT AAGATTGAAAGTTTTGATCCTGGTGCAGGGGGTAAACACAAAAGAAGAAGAGGTTTTTATGCAAAAGGTACTAAAAGTTT TCACAAATGGTTCAATAAAAATATGGAAGATATAATTACCCCTTGGTTAGATAAAGTTAATTTTCAAACTATGCAAGAAA TTAAATTGGAAAATAATTCTATCCCTTTTAAAGAAAATAAAAATTAA
Upstream 100 bases:
>100_bases GAAGCAATTTTGGAAAATAAAATCAATTCAAGAATTGGATAAAAATGAAATATATATTCATTACACAAGAAACATTAAAG ATGATTAAAGTAAAGAAAAT
Downstream 100 bases:
>100_bases ATGACTAGATCTTTGCCTATATTAATAATGTAACTTTATTAAAAATGTGAAGATGGATTTTATTAAAATATTGGAGAAAA AAATAGAAATAGATAATAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MNHIEHKVEIKLSIQEINKKTWNELRKEINNPFYEWEWLYNLELSKSVSRETGWQPLYFVAYQNEQICGIAPLFLKNHSY GEFIFDQSFARLAQDLNLNYYPKLIGMSPYSPINGYEFLYKETKNKAPITNSLIKHIDNFALKNNILSCNFLYVNENWGK HLKSLGYKEWINTSSEWKTNGEKSFDDFLLRFNSNQRKNIKKERKSISKQNLEIKIHTEESINLEIVQKMHNFYEQHCLR WGVWGSKYLTSEFFEKILENKQNLLFFSASRNDSERTIAMSMCVKNKKNIWGRYWGSQEEILNLHFELCYYQPIEWAITN KIESFDPGAGGKHKRRRGFYAKGTKSFHKWFNKNMEDIITPWLDKVNFQTMQEIKLENNSIPFKENKN
Sequences:
>Translated_388_residues MNHIEHKVEIKLSIQEINKKTWNELRKEINNPFYEWEWLYNLELSKSVSRETGWQPLYFVAYQNEQICGIAPLFLKNHSY GEFIFDQSFARLAQDLNLNYYPKLIGMSPYSPINGYEFLYKETKNKAPITNSLIKHIDNFALKNNILSCNFLYVNENWGK HLKSLGYKEWINTSSEWKTNGEKSFDDFLLRFNSNQRKNIKKERKSISKQNLEIKIHTEESINLEIVQKMHNFYEQHCLR WGVWGSKYLTSEFFEKILENKQNLLFFSASRNDSERTIAMSMCVKNKKNIWGRYWGSQEEILNLHFELCYYQPIEWAITN KIESFDPGAGGKHKRRRGFYAKGTKSFHKWFNKNMEDIITPWLDKVNFQTMQEIKLENNSIPFKENKN >Mature_388_residues MNHIEHKVEIKLSIQEINKKTWNELRKEINNPFYEWEWLYNLELSKSVSRETGWQPLYFVAYQNEQICGIAPLFLKNHSY GEFIFDQSFARLAQDLNLNYYPKLIGMSPYSPINGYEFLYKETKNKAPITNSLIKHIDNFALKNNILSCNFLYVNENWGK HLKSLGYKEWINTSSEWKTNGEKSFDDFLLRFNSNQRKNIKKERKSISKQNLEIKIHTEESINLEIVQKMHNFYEQHCLR WGVWGSKYLTSEFFEKILENKQNLLFFSASRNDSERTIAMSMCVKNKKNIWGRYWGSQEEILNLHFELCYYQPIEWAITN KIESFDPGAGGKHKRRRGFYAKGTKSFHKWFNKNMEDIITPWLDKVNFQTMQEIKLENNSIPFKENKN
Specific function: Unknown
COG id: COG3146
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46456; Mature: 46456
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHIEHKVEIKLSIQEINKKTWNELRKEINNPFYEWEWLYNLELSKSVSRETGWQPLYFV CCCCCEEEEEEEEHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEHHHHHHHHCCCCCEEEE AYQNEQICGIAPLFLKNHSYGEFIFDQSFARLAQDLNLNYYPKLIGMSPYSPINGYEFLY EECCCCCCCEEHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCHHHHH KETKNKAPITNSLIKHIDNFALKNNILSCNFLYVNENWGKHLKSLGYKEWINTSSEWKTN HHCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHCCHHHHHCCCCCCCCC GEKSFDDFLLRFNSNQRKNIKKERKSISKQNLEIKIHTEESINLEIVQKMHNFYEQHCLR CCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH WGVWGSKYLTSEFFEKILENKQNLLFFSASRNDSERTIAMSMCVKNKKNIWGRYWGSQEE HCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCHHCCCCHHH ILNLHFELCYYQPIEWAITNKIESFDPGAGGKHKRRRGFYAKGTKSFHKWFNKNMEDIIT HHHHHEEEEEECCCHHHHHCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHCCCHHHHHH PWLDKVNFQTMQEIKLENNSIPFKENKN HHHHHCCHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MNHIEHKVEIKLSIQEINKKTWNELRKEINNPFYEWEWLYNLELSKSVSRETGWQPLYFV CCCCCEEEEEEEEHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEHHHHHHHHCCCCCEEEE AYQNEQICGIAPLFLKNHSYGEFIFDQSFARLAQDLNLNYYPKLIGMSPYSPINGYEFLY EECCCCCCCEEHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCHHHHH KETKNKAPITNSLIKHIDNFALKNNILSCNFLYVNENWGKHLKSLGYKEWINTSSEWKTN HHCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHCCHHHHHCCCCCCCCC GEKSFDDFLLRFNSNQRKNIKKERKSISKQNLEIKIHTEESINLEIVQKMHNFYEQHCLR CCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH WGVWGSKYLTSEFFEKILENKQNLLFFSASRNDSERTIAMSMCVKNKKNIWGRYWGSQEE HCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCHHCCCCHHH ILNLHFELCYYQPIEWAITNKIESFDPGAGGKHKRRRGFYAKGTKSFHKWFNKNMEDIIT HHHHHEEEEEECCCHHHHHCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHCCCHHHHHH PWLDKVNFQTMQEIKLENNSIPFKENKN HHHHHCCHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA