Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

Click here to switch to the map view.

The map label for this gene is 123965351

Identifier: 123965351

GI number: 123965351

Start: 117157

End: 117543

Strand: Reverse

Name: 123965351

Synonym: P9515_01161

Alternate gene names: NA

Gene position: 117543-117157 (Counterclockwise)

Preceding gene: 123965352

Following gene: 123965350

Centisome position: 6.9

GC content: 27.91

Gene sequence:

>387_bases
ATGGATTTTATTAAAATATTGGAGAAAAAAATAGAAATAGATAATAATTTATCTAATAGATATATTGAGCTAGACCCAAA
TGGATATTTCATAATAAAGATAGATATAGAGAAAAAACATATTATCTTGGAACATTATTTGAATACTATTAATGAAGAGG
GGTATGCACTAGATCCAAAAACTAATGAACCTATTAAATGTGACTCAAGAGAAATCAAAACTTGTAATGAGACCTTTACA
GGAATAAGTGCTAAAGAGATTGGGATAGCAATAACCGAAAAGCGTAATGATCTAATATCTAGATTTGATCATGCTTTATA
TTTAGGACGAGAATTACAAAAAGCCGAAGAATGTTTGTACAAACAGTTAACCTATGTCCAAGATTAA

Upstream 100 bases:

>100_bases
ATTAAATTGGAAAATAATTCTATCCCTTTTAAAGAAAATAAAAATTAAATGACTAGATCTTTGCCTATATTAATAATGTA
ACTTTATTAAAAATGTGAAG

Downstream 100 bases:

>100_bases
GAAATTAAACGAAAAAATTCTAATTTTTATTGGGATGCTAAATTAAATAAAAACATAAAGAGATAAATGAACATTATTTT
CTATTTTGCATTTCTTGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MDFIKILEKKIEIDNNLSNRYIELDPNGYFIIKIDIEKKHIILEHYLNTINEEGYALDPKTNEPIKCDSREIKTCNETFT
GISAKEIGIAITEKRNDLISRFDHALYLGRELQKAEECLYKQLTYVQD

Sequences:

>Translated_128_residues
MDFIKILEKKIEIDNNLSNRYIELDPNGYFIIKIDIEKKHIILEHYLNTINEEGYALDPKTNEPIKCDSREIKTCNETFT
GISAKEIGIAITEKRNDLISRFDHALYLGRELQKAEECLYKQLTYVQD
>Mature_128_residues
MDFIKILEKKIEIDNNLSNRYIELDPNGYFIIKIDIEKKHIILEHYLNTINEEGYALDPKTNEPIKCDSREIKTCNETFT
GISAKEIGIAITEKRNDLISRFDHALYLGRELQKAEECLYKQLTYVQD

Specific function: Unknown

COG id: COG0294

COG function: function code H; Dihydropteroate synthase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ycf91 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017260 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15027; Mature: 15027

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFIKILEKKIEIDNNLSNRYIELDPNGYFIIKIDIEKKHIILEHYLNTINEEGYALDPK
CCHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEECCCHHHHHHHHHHHHCCCCEEECCC
TNEPIKCDSREIKTCNETFTGISAKEIGIAITEKRNDLISRFDHALYLGRELQKAEECLY
CCCCCCCCCCHHHHHHHHHCCCCHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
KQLTYVQD
HHHHHCCC
>Mature Secondary Structure
MDFIKILEKKIEIDNNLSNRYIELDPNGYFIIKIDIEKKHIILEHYLNTINEEGYALDPK
CCHHHHHHHHHCCCCCCCCCEEEECCCCEEEEEEECCCHHHHHHHHHHHHCCCCEEECCC
TNEPIKCDSREIKTCNETFTGISAKEIGIAITEKRNDLISRFDHALYLGRELQKAEECLY
CCCCCCCCCCHHHHHHHHHCCCCHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
KQLTYVQD
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]