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The map label for this gene is 123965344

Identifier: 123965344

GI number: 123965344

Start: 109136

End: 110566

Strand: Reverse

Name: 123965344

Synonym: P9515_01091

Alternate gene names: NA

Gene position: 110566-109136 (Counterclockwise)

Preceding gene: 123965345

Following gene: 123965343

Centisome position: 6.49

GC content: 26.9

Gene sequence:

>1431_bases
ATGCTTAGAAAACTTATACATCCAGTCTTATTTTTTCCACTTTTTTTATTTATTAATTCTCAAAAAGCAGTATTAAGTGG
CTCTAACAATAATATTGAAGCAATCCTAGAAGAAAACGAAACCCAAATATTCCTTAATTATTCAGAAATAAAAAATATTA
CTTTAAAAAATAATCAAGAACTTAAGGCATTAGAAAATCTAGTCGATTCATCGACTTTTACTCTTTCGAGTAAAATTGCT
AAAAGATATCCTTCATTAGATTTGCAAGCCAGTGGATTTCCAAAATATGTTTCAGGAAAAAACTATAACAGTACCTCATC
AACTACGAAGACCTCTCAATTCTCTGCAAATCCATCCCTTAATATTAGATTAGACTTAATAGATCCTTTAAGAGGATCTG
AAATTCAAATAGCTAAAAATAATTATGCGATAGCAAGAAATAATTATGAGATTAAAAAGAAAGACCTCATTCAAGAAGCA
AAATCTAGATACCACAAACTACAAAAATCTTATCAAGATATTAAAAACAAAAAATCCTCTCTTGATTTATCAGTTACTAG
TTTGAAAGATGCTAAGTCTAAATTTGATGCGGGTATAGGCACTAAATTTGAAGTTCTAGAAGCTAATGCACAATTATCTA
GAGATAGGCAAACACTAAATGAAAAAAAAATTCAAAATCAGATCAACAAAATTGCACTTAAAGAAATCTTAAATATAAAT
GGTGATTTCGACATAAATAAAAAGCAAAAATTAATAGGTTTCTGGAACCACAAATTAAATAAGAACATAAATGAAGGTTT
ACTTAAGAGTCTTTCTCTGAAAAATATTACTCTTCAAAAAGCAATCAAAGAAAATCAAGCAAAAAATTATCTAAACACTT
ATAAACCAAATGTTTATATAAGTAATGTATTAACTACTTCATTTTCAAAGGGTGATTCTTTAGCAGTCCAAATAGATTCT
GGAAAATCTGGATCTGCCTATACAAATACTGTCAGCTTAAACTTTGGTTGGAATATTTTTGATGGTGGGCAAAATAAAAA
TTTATATAAATCAAGCATAGCCGATGCTCAATCAGAAGATTACTCTTATAGAAATCTTGAAAATGTTATTAAATCCAAAA
TTAGTAAAGCTTATTTGAATTTAAAATTAAATGAAGAAAAAATTATATCCTCTCTAGAAGAAATATCTTCTACAGAAGAA
TCTCTAAGACTAGCAAGATTAAGATATGAGGTAGGAATATCGACATTGAAAGATGTTCTTGTAAGACAAAAAGAATTGAG
TAATGCTAATTCAAAAAATATTGATGCAATTTATAATTACAATTTAAATTTGGATGAATTAGAGAGATTGACTTATCTTG
AGATAAGTAATATTTGTGATGAAAGCAATGGTTTCATAAATAATGATATTAAATCTATTTGCAATATTTGA

Upstream 100 bases:

>100_bases
GTTTCAAATAAACTGAAAACTAATATTCACGTTCTTGATGATACAAATGATATTATTAATAATCTAATTGGTATATCTAA
TACTTATAAAATACTTGATT

Downstream 100 bases:

>100_bases
ATATGAATAAAAATAATTTAACCGATCAACAGTTAAAAGATTTAGATTCATTATTTGAACTGGTGAGTGATCGCCAATTA
AAAGACTTTGGGAACATTAG

Product: RND family outer membrane efflux protein

Products: NA

Alternate protein names: RND Family Outer Membrane Efflux Protein; Tranporter Outer Membrane Factor Family; Outer Membrane Protein-Like; Outer Membrane Efflux Family Protein; RND Family Outer Membrane Efflux Protein-Like

Number of amino acids: Translated: 476; Mature: 476

Protein sequence:

>476_residues
MLRKLIHPVLFFPLFLFINSQKAVLSGSNNNIEAILEENETQIFLNYSEIKNITLKNNQELKALENLVDSSTFTLSSKIA
KRYPSLDLQASGFPKYVSGKNYNSTSSTTKTSQFSANPSLNIRLDLIDPLRGSEIQIAKNNYAIARNNYEIKKKDLIQEA
KSRYHKLQKSYQDIKNKKSSLDLSVTSLKDAKSKFDAGIGTKFEVLEANAQLSRDRQTLNEKKIQNQINKIALKEILNIN
GDFDINKKQKLIGFWNHKLNKNINEGLLKSLSLKNITLQKAIKENQAKNYLNTYKPNVYISNVLTTSFSKGDSLAVQIDS
GKSGSAYTNTVSLNFGWNIFDGGQNKNLYKSSIADAQSEDYSYRNLENVIKSKISKAYLNLKLNEEKIISSLEEISSTEE
SLRLARLRYEVGISTLKDVLVRQKELSNANSKNIDAIYNYNLNLDELERLTYLEISNICDESNGFINNDIKSICNI

Sequences:

>Translated_476_residues
MLRKLIHPVLFFPLFLFINSQKAVLSGSNNNIEAILEENETQIFLNYSEIKNITLKNNQELKALENLVDSSTFTLSSKIA
KRYPSLDLQASGFPKYVSGKNYNSTSSTTKTSQFSANPSLNIRLDLIDPLRGSEIQIAKNNYAIARNNYEIKKKDLIQEA
KSRYHKLQKSYQDIKNKKSSLDLSVTSLKDAKSKFDAGIGTKFEVLEANAQLSRDRQTLNEKKIQNQINKIALKEILNIN
GDFDINKKQKLIGFWNHKLNKNINEGLLKSLSLKNITLQKAIKENQAKNYLNTYKPNVYISNVLTTSFSKGDSLAVQIDS
GKSGSAYTNTVSLNFGWNIFDGGQNKNLYKSSIADAQSEDYSYRNLENVIKSKISKAYLNLKLNEEKIISSLEEISSTEE
SLRLARLRYEVGISTLKDVLVRQKELSNANSKNIDAIYNYNLNLDELERLTYLEISNICDESNGFINNDIKSICNI
>Mature_476_residues
MLRKLIHPVLFFPLFLFINSQKAVLSGSNNNIEAILEENETQIFLNYSEIKNITLKNNQELKALENLVDSSTFTLSSKIA
KRYPSLDLQASGFPKYVSGKNYNSTSSTTKTSQFSANPSLNIRLDLIDPLRGSEIQIAKNNYAIARNNYEIKKKDLIQEA
KSRYHKLQKSYQDIKNKKSSLDLSVTSLKDAKSKFDAGIGTKFEVLEANAQLSRDRQTLNEKKIQNQINKIALKEILNIN
GDFDINKKQKLIGFWNHKLNKNINEGLLKSLSLKNITLQKAIKENQAKNYLNTYKPNVYISNVLTTSFSKGDSLAVQIDS
GKSGSAYTNTVSLNFGWNIFDGGQNKNLYKSSIADAQSEDYSYRNLENVIKSKISKAYLNLKLNEEKIISSLEEISSTEE
SLRLARLRYEVGISTLKDVLVRQKELSNANSKNIDAIYNYNLNLDELERLTYLEISNICDESNGFINNDIKSICNI

Specific function: Unknown

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53962; Mature: 53962

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: PS00307 LECTIN_LEGUME_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.2 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRKLIHPVLFFPLFLFINSQKAVLSGSNNNIEAILEENETQIFLNYSEIKNITLKNNQE
CHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEECCCCEEEEEHHHHCEEEECCCCH
LKALENLVDSSTFTLSSKIAKRYPSLDLQASGFPKYVSGKNYNSTSSTTKTSQFSANPSL
HHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCE
NIRLDLIDPLRGSEIQIAKNNYAIARNNYEIKKKDLIQEAKSRYHKLQKSYQDIKNKKSS
EEEEEEECCCCCCEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LDLSVTSLKDAKSKFDAGIGTKFEVLEANAQLSRDRQTLNEKKIQNQINKIALKEILNIN
CCEEEHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GDFDINKKQKLIGFWNHKLNKNINEGLLKSLSLKNITLQKAIKENQAKNYLNTYKPNVYI
CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCEEE
SNVLTTSFSKGDSLAVQIDSGKSGSAYTNTVSLNFGWNIFDGGQNKNLYKSSIADAQSED
EHHHHHCCCCCCEEEEEECCCCCCCEEEEEEEEEECCEEECCCCCCCHHHHHHCCCCCCC
YSYRNLENVIKSKISKAYLNLKLNEEKIISSLEEISSTEESLRLARLRYEVGISTLKDVL
CCHHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRQKELSNANSKNIDAIYNYNLNLDELERLTYLEISNICDESNGFINNDIKSICNI
HHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCC
>Mature Secondary Structure
MLRKLIHPVLFFPLFLFINSQKAVLSGSNNNIEAILEENETQIFLNYSEIKNITLKNNQE
CHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEECCCCEEEEEHHHHCEEEECCCCH
LKALENLVDSSTFTLSSKIAKRYPSLDLQASGFPKYVSGKNYNSTSSTTKTSQFSANPSL
HHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCE
NIRLDLIDPLRGSEIQIAKNNYAIARNNYEIKKKDLIQEAKSRYHKLQKSYQDIKNKKSS
EEEEEEECCCCCCEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LDLSVTSLKDAKSKFDAGIGTKFEVLEANAQLSRDRQTLNEKKIQNQINKIALKEILNIN
CCEEEHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GDFDINKKQKLIGFWNHKLNKNINEGLLKSLSLKNITLQKAIKENQAKNYLNTYKPNVYI
CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCEEE
SNVLTTSFSKGDSLAVQIDSGKSGSAYTNTVSLNFGWNIFDGGQNKNLYKSSIADAQSED
EHHHHHCCCCCCEEEEEECCCCCCCEEEEEEEEEECCEEECCCCCCCHHHHHHCCCCCCC
YSYRNLENVIKSKISKAYLNLKLNEEKIISSLEEISSTEESLRLARLRYEVGISTLKDVL
CCHHHHHHHHHHHHHHHHEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRQKELSNANSKNIDAIYNYNLNLDELERLTYLEISNICDESNGFINNDIKSICNI
HHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA