| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is suhB [H]
Identifier: 123965343
GI number: 123965343
Start: 108333
End: 109133
Strand: Reverse
Name: suhB [H]
Synonym: P9515_01081
Alternate gene names: 123965343
Gene position: 109133-108333 (Counterclockwise)
Preceding gene: 123965344
Following gene: 123965342
Centisome position: 6.4
GC content: 34.71
Gene sequence:
>801_bases ATGAATAAAAATAATTTAACCGATCAACAGTTAAAAGATTTAGATTCATTATTTGAACTGGTGAGTGATCGCCAATTAAA AGACTTTGGGAACATTAGTGCAAGTAACAAGTCAGACGGTTCATTAGTTACAAGTTGTGATTTATGGAGCGATAAAACGA TTGTAAAGGCTCTATCTATAATTGCTCCTGATGAGGGAGTGCTCAGTGAAGAGGGAGGTAAGTTAGTTCCTAAAACAAAT GCTTATTGGATAGTAGATCCTTTAGATGGTACGACAAATTTCGCTGCAGGAATACCATATTGGTCTATATCAATAGCAAG ATTTGTAAATGGCAACCCTCAATCCTCTTTTCTAATTATTCCTACATTAAAGAAAAAATTTGTAGCAATCAAAGGAAGGG GTGTTTGGCTCAATAACAAGAAAATAGAAGTTAACAGCCATAAGCAAAACAGTGAATGTGTATCCTTATGCAGTAGATCT ATCAAGATTTTACAAAAGAAACCTGATTCTATATTTCCCGGAAAAATAAGACTTCTTGGTGTGTCTAGTTTAAATTTAAC GAGCGTAGCAATGGGACAGACTTTTGGAGCCATAGAATCAACTCCAAAAATATGGGATATTGCTGCAGCATGGCTAATAC TCGAGGAGCTTAACTGTTCTATCGAATGGTTAGAAACGAATCCAATGCATTTGTCTGCAGAACAAGACTTAAAAGATACT AATTTCCCCTTAATTGCTTCTTGGAACCAAGAAAAAATTAAAGTTTTAAGGCCATGGGGTGATTTATTAATTGAAAAATA G
Upstream 100 bases:
>100_bases ATGAATTAGAGAGATTGACTTATCTTGAGATAAGTAATATTTGTGATGAAAGCAATGGTTTCATAAATAATGATATTAAA TCTATTTGCAATATTTGAAT
Downstream 100 bases:
>100_bases TTGAATCATAAATATATAAAAGACTTGAAAAATATCCCTATTAGATACAATAAATATGATATTGGAGGAGTATTTGAAGA GAATTGATATGCAGCGCAGC
Product: inositol monophosphate family protein
Products: NA
Alternate protein names: I-1-Pase; IMPase; Inositol-1-phosphatase [H]
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MNKNNLTDQQLKDLDSLFELVSDRQLKDFGNISASNKSDGSLVTSCDLWSDKTIVKALSIIAPDEGVLSEEGGKLVPKTN AYWIVDPLDGTTNFAAGIPYWSISIARFVNGNPQSSFLIIPTLKKKFVAIKGRGVWLNNKKIEVNSHKQNSECVSLCSRS IKILQKKPDSIFPGKIRLLGVSSLNLTSVAMGQTFGAIESTPKIWDIAAAWLILEELNCSIEWLETNPMHLSAEQDLKDT NFPLIASWNQEKIKVLRPWGDLLIEK
Sequences:
>Translated_266_residues MNKNNLTDQQLKDLDSLFELVSDRQLKDFGNISASNKSDGSLVTSCDLWSDKTIVKALSIIAPDEGVLSEEGGKLVPKTN AYWIVDPLDGTTNFAAGIPYWSISIARFVNGNPQSSFLIIPTLKKKFVAIKGRGVWLNNKKIEVNSHKQNSECVSLCSRS IKILQKKPDSIFPGKIRLLGVSSLNLTSVAMGQTFGAIESTPKIWDIAAAWLILEELNCSIEWLETNPMHLSAEQDLKDT NFPLIASWNQEKIKVLRPWGDLLIEK >Mature_266_residues MNKNNLTDQQLKDLDSLFELVSDRQLKDFGNISASNKSDGSLVTSCDLWSDKTIVKALSIIAPDEGVLSEEGGKLVPKTN AYWIVDPLDGTTNFAAGIPYWSISIARFVNGNPQSSFLIIPTLKKKFVAIKGRGVWLNNKKIEVNSHKQNSECVSLCSRS IKILQKKPDSIFPGKIRLLGVSSLNLTSVAMGQTFGAIESTPKIWDIAAAWLILEELNCSIEWLETNPMHLSAEQDLKDT NFPLIASWNQEKIKVLRPWGDLLIEK
Specific function: Unknown
COG id: COG0483
COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI5031789, Length=229, Percent_Identity=24.4541484716157, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI221625487, Length=229, Percent_Identity=24.4541484716157, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI7657236, Length=238, Percent_Identity=23.5294117647059, Blast_Score=73, Evalue=3e-13, Organism=Escherichia coli, GI1788882, Length=194, Percent_Identity=27.8350515463918, Blast_Score=86, Evalue=2e-18, Organism=Caenorhabditis elegans, GI193202572, Length=197, Percent_Identity=28.4263959390863, Blast_Score=65, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6321836, Length=232, Percent_Identity=27.5862068965517, Blast_Score=69, Evalue=7e-13, Organism=Drosophila melanogaster, GI21357303, Length=243, Percent_Identity=27.9835390946502, Blast_Score=81, Evalue=7e-16, Organism=Drosophila melanogaster, GI21357329, Length=209, Percent_Identity=26.7942583732057, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI24664922, Length=168, Percent_Identity=30.952380952381, Blast_Score=68, Evalue=6e-12, Organism=Drosophila melanogaster, GI24664926, Length=189, Percent_Identity=27.5132275132275, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 - InterPro: IPR022337 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.25 [H]
Molecular weight: Translated: 29558; Mature: 29558
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKNNLTDQQLKDLDSLFELVSDRQLKDFGNISASNKSDGSLVTSCDLWSDKTIVKALSI CCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHH IAPDEGVLSEEGGKLVPKTNAYWIVDPLDGTTNFAAGIPYWSISIARFVNGNPQSSFLII CCCCCCCCCCCCCEECCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEE PTLKKKFVAIKGRGVWLNNKKIEVNSHKQNSECVSLCSRSIKILQKKPDSIFPGKIRLLG ECCCCEEEEEECCEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE VSSLNLTSVAMGQTFGAIESTPKIWDIAAAWLILEELNCSIEWLETNPMHLSAEQDLKDT ECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCEEECCCCCCCCC NFPLIASWNQEKIKVLRPWGDLLIEK CCCEEEECCCCEEEEECCCHHHEECC >Mature Secondary Structure MNKNNLTDQQLKDLDSLFELVSDRQLKDFGNISASNKSDGSLVTSCDLWSDKTIVKALSI CCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHH IAPDEGVLSEEGGKLVPKTNAYWIVDPLDGTTNFAAGIPYWSISIARFVNGNPQSSFLII CCCCCCCCCCCCCEECCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEE PTLKKKFVAIKGRGVWLNNKKIEVNSHKQNSECVSLCSRSIKILQKKPDSIFPGKIRLLG ECCCCEEEEEECCEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE VSSLNLTSVAMGQTFGAIESTPKIWDIAAAWLILEELNCSIEWLETNPMHLSAEQDLKDT ECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCEEECCCCCCCCC NFPLIASWNQEKIKVLRPWGDLLIEK CCCEEEECCCCEEEEECCCHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]