Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

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The map label for this gene is 123965266

Identifier: 123965266

GI number: 123965266

Start: 31190

End: 31609

Strand: Reverse

Name: 123965266

Synonym: P9515_00311

Alternate gene names: NA

Gene position: 31609-31190 (Counterclockwise)

Preceding gene: 123965267

Following gene: 123965265

Centisome position: 1.85

GC content: 34.05

Gene sequence:

>420_bases
ATGAAAAGATGCATAAAGGTTAAATTACTTTTACCTATAGTTGCTATATTTGTCCCGACCTTACTATTTATCCCAAAAGC
TAGTGCAGGTTCGTTTGGAGCGGAAATATTTTGTACTATGAGAGACGGTGGCAATGATCATGAAAGCAGCTGGCAATCGG
CCTACAGCTACATTAAAAAACAAAAAGGTGGGCTTTTTAAGACGTCTCCAAAACAAGCCGCTGGACAAATTATTGAGACT
GTTGTTAGAGAAAGAGATAAATTTTCTTATTGCGTTGAATATTTAGATCAACTTCATCCTGACAGAAAACTTCAAATGGA
AAATAATAGAAAAGAAAAAAGGAAAAAACAAGAAGAGCGTCTTCGAGAAAAAGAAAATATAAACTACTCTGAAGAATCCT
TTGATAGATACAGTTATTAA

Upstream 100 bases:

>100_bases
AATTGTAAAAATGCTAACCCTGGCAGGAGTCATCAAATCTTAAAGATCTCTAGACATAATCAAAATAAAAGATATTTTTA
AATAGACAATTAAAAAAAAA

Downstream 100 bases:

>100_bases
TTTTTAGAAAATAAATAATTACTTTTAGCTCACAAGTTAAATATAATTTTTTGAGTATAATCGTATACACAAAATATTTT
TTATATGAAAAATATATAGA

Product: type II secretion system protein-like protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MKRCIKVKLLLPIVAIFVPTLLFIPKASAGSFGAEIFCTMRDGGNDHESSWQSAYSYIKKQKGGLFKTSPKQAAGQIIET
VVRERDKFSYCVEYLDQLHPDRKLQMENNRKEKRKKQEERLREKENINYSEESFDRYSY

Sequences:

>Translated_139_residues
MKRCIKVKLLLPIVAIFVPTLLFIPKASAGSFGAEIFCTMRDGGNDHESSWQSAYSYIKKQKGGLFKTSPKQAAGQIIET
VVRERDKFSYCVEYLDQLHPDRKLQMENNRKEKRKKQEERLREKENINYSEESFDRYSY
>Mature_139_residues
MKRCIKVKLLLPIVAIFVPTLLFIPKASAGSFGAEIFCTMRDGGNDHESSWQSAYSYIKKQKGGLFKTSPKQAAGQIIET
VVRERDKFSYCVEYLDQLHPDRKLQMENNRKEKRKKQEERLREKENINYSEESFDRYSY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16293; Mature: 16293

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRCIKVKLLLPIVAIFVPTLLFIPKASAGSFGAEIFCTMRDGGNDHESSWQSAYSYIKK
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH
QKGGLFKTSPKQAAGQIIETVVRERDKFSYCVEYLDQLHPDRKLQMENNRKEKRKKQEER
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHH
LREKENINYSEESFDRYSY
HHHHHCCCCCHHHHHHCCC
>Mature Secondary Structure
MKRCIKVKLLLPIVAIFVPTLLFIPKASAGSFGAEIFCTMRDGGNDHESSWQSAYSYIKK
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH
QKGGLFKTSPKQAAGQIIETVVRERDKFSYCVEYLDQLHPDRKLQMENNRKEKRKKQEER
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHH
LREKENINYSEESFDRYSY
HHHHHCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA