Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

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The map label for this gene is 123969420

Identifier: 123969420

GI number: 123969420

Start: 1623422

End: 1623841

Strand: Direct

Name: 123969420

Synonym: A9601_18881

Alternate gene names: NA

Gene position: 1623422-1623841 (Clockwise)

Preceding gene: 123969417

Following gene: 123969421

Centisome position: 97.22

GC content: 30.95

Gene sequence:

>420_bases
ATGGATGCAACATTAGTTAAAGATATCGGAATTAAAGCATTATTAGTTGGAGGAGCTGTACTAGTTTCTTTTTGGACTTT
TAATGCAGTCAAATTAGTTATAAGCGCCAGAGGAATTAATCCATTAGTAAGAAAGTTTTTCGATCAAATAGCTGCTGGCA
GAATTGATGCAGCCTATGGTTTGACTACAAAAACTTATAAAACTCATGTAAAACGACAAGACTTTCTTAAATTTTTAGCT
AGTTTAAACCTCAACAAATACAGAAATTTAAAATCAGGAAGACCTAGAGTCCAAGAAGATCAAATCATAATAACTTTGAA
TTTAAAATCAGAAGACAAACAAGATGAGCTCCCATTAGATTTTACTTTTGCAAAAACTGACAATGATTGGAAAATAGACA
GAATAGCTAAAGTGAATTAA

Upstream 100 bases:

>100_bases
GAGGAATTACAGGCATTATGGATTAAAATTAGTATTATTTTGACAAAAAAGCCATCAAAAACGATTTCTTTTCTTAAAGT
AATAAAAAAGTAAAATTAAC

Downstream 100 bases:

>100_bases
TAATTTCTTGTGAGGCAAAAAAAATTGTTTAAACAAGAAATAATACATCAATTAGAATTACACCCCAGTAGATTAGATAA
AGAAAAAATCATTTTAGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MDATLVKDIGIKALLVGGAVLVSFWTFNAVKLVISARGINPLVRKFFDQIAAGRIDAAYGLTTKTYKTHVKRQDFLKFLA
SLNLNKYRNLKSGRPRVQEDQIIITLNLKSEDKQDELPLDFTFAKTDNDWKIDRIAKVN

Sequences:

>Translated_139_residues
MDATLVKDIGIKALLVGGAVLVSFWTFNAVKLVISARGINPLVRKFFDQIAAGRIDAAYGLTTKTYKTHVKRQDFLKFLA
SLNLNKYRNLKSGRPRVQEDQIIITLNLKSEDKQDELPLDFTFAKTDNDWKIDRIAKVN
>Mature_139_residues
MDATLVKDIGIKALLVGGAVLVSFWTFNAVKLVISARGINPLVRKFFDQIAAGRIDAAYGLTTKTYKTHVKRQDFLKFLA
SLNLNKYRNLKSGRPRVQEDQIIITLNLKSEDKQDELPLDFTFAKTDNDWKIDRIAKVN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15756; Mature: 15756

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDATLVKDIGIKALLVGGAVLVSFWTFNAVKLVISARGINPLVRKFFDQIAAGRIDAAYG
CCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHCCCCCHHCC
LTTKTYKTHVKRQDFLKFLASLNLNKYRNLKSGRPRVQEDQIIITLNLKSEDKQDELPLD
CCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEE
FTFAKTDNDWKIDRIAKVN
EEEECCCCCCCEEEEEECC
>Mature Secondary Structure
MDATLVKDIGIKALLVGGAVLVSFWTFNAVKLVISARGINPLVRKFFDQIAAGRIDAAYG
CCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHCCCCCHHCC
LTTKTYKTHVKRQDFLKFLASLNLNKYRNLKSGRPRVQEDQIIITLNLKSEDKQDELPLD
CCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEE
FTFAKTDNDWKIDRIAKVN
EEEECCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA