Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

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The map label for this gene is 123969401

Identifier: 123969401

GI number: 123969401

Start: 1604760

End: 1606313

Strand: Reverse

Name: 123969401

Synonym: A9601_18691

Alternate gene names: NA

Gene position: 1606313-1604760 (Counterclockwise)

Preceding gene: 123969408

Following gene: 123969400

Centisome position: 96.19

GC content: 28.31

Gene sequence:

>1554_bases
ATGAAACTTAAATTTGCCTTTTTAAACTTATTTTTAGGTTGTATTTCTCTTTTAGTAATAAACACTAAATTTATTTCAAA
TGCAAAAGGAGAAGAATTGCTAAAGGTTGAACTCCATAATGAAATTAAAAAAGGAAAATTTTTAATTGGTTTAAAGCAAT
ATTTAGGTGGGGAGAATGATAGTTTTTCGGAGAAAAAGAATATAAACTTTACAACTAATAAAGGTTTTGTAAACTTGATA
TCGTCCAACGGTATTAAGCATAAATCAAAACAGATAAATATTACCTGGGCGGATATTCCTGTTAAAAATCCAAAAACAAT
TGAAAGAATTGTTTTTGGTCCTTTTGCTAGCTATGAATCGGCAAAAAAACAATCAGAGAAACTAAGAGATAAGGGATTTG
ATACGACTGTTGCCTACCCTAAAAATTGGGAAGTATGGATTCCATTTCAAGAGGATCTGCCAGAGTTTGAATTAAAAAAT
AAGATTTATAGAAAAATAAAAAATTTTCAAATTACTCCTGTTCTTAGAAATGACTACAGTGGTATAAAACTTGAAGGTCC
CATATGTATTTATTCTGAAGAGAAAATAAAAATAAATGGTGTTAATTTTGGCAAAAATTTTTATTTAATAAAGGATTTAT
ATGGAACTTGGACCTTAGTTCAAAAAATTGAATTTGATGACTATTTGGCAGGTGTTTTGCCATATGAAATTGGACCGAAT
TCTCCTTTAGAAGCACTCAAGGCTCAAGCAGTTATTGCAAGAACTTGGGGCATATTTAATTCTGATAGATTTAATATGGA
TAAATATCATTTATGTATAAGCACTCAATGTCAAGTTTATAAGCCTTCTGAAATTTCATATAAAAACGTACAAAAAGCCA
TAGACGAAACTTCAAATTTAATTCTCACTCATGAAAATCAACCAATAAATGCTTTTTATCATGGTTCTAATGGTGGAGTA
TCTGCTACTGCAGGCGAGTCTTGGCAAATTCAAGATTATTCTTATTTCAATTCAATCATTGATGGCTCTAAATCATTAAA
TAACATTTTTAAACTACCAATTACAAATGAATTTTATTTAAATAATTTTTTAGATTTTGATAAGGAACAGTTTTATGGGA
GTAATCATTCTCTTTTTCGATGGAATAAGAAAATTTCTAGTCTTGAAATTAAAGAAAAGTTAATTAAAAACAAACTTATA
AATATTAATGAAGATGTTTTGGATTTAAATTCTATTGAACGTGGTTCTAGTGGCAGAGTGACAAAATTGGAAATACAAAC
TGACAAGGGTAATAAATCTATTGTTCTTGTTAAAGATGATATTCGACGGGTATTAAATTTTATACCTAGTAATTTGTTTA
CTATTAATAAATTAAATGATGATTTATGGCTTTTGAGAGGAGGAGGCTTCGGTCATGGTGTAGGTTTATCTCAGTCAGGA
GCAATTGAAATGGCTAAATTAGGATTCTCTTATGAACAAATATTGAATCATTACTATCGAAATGCAAAACTAAAAAAATT
TGAGATATTGTCTCAATGGAAGTTAAGTAATTAA

Upstream 100 bases:

>100_bases
TTTAGACATTTAAGTCAAATGTGTTTAATTAGGATAATCTAAACCTTTATACGCATTGGTGCAAATTAAAGTTTTTAATT
GATAAGGAAAGTTCTAATTT

Downstream 100 bases:

>100_bases
CAATTTACTTTTATGAGTAAGGGTTTTTATAAAAATCGAAGATTGAAGTCGTTTATATTTCTTAGTGCTTGTTTTTTAGT
AGCTTTTATTCCTCACGCTA

Product: putative amidase enhancer

Products: NA

Alternate protein names: H-34 [H]

Number of amino acids: Translated: 517; Mature: 517

Protein sequence:

>517_residues
MKLKFAFLNLFLGCISLLVINTKFISNAKGEELLKVELHNEIKKGKFLIGLKQYLGGENDSFSEKKNINFTTNKGFVNLI
SSNGIKHKSKQINITWADIPVKNPKTIERIVFGPFASYESAKKQSEKLRDKGFDTTVAYPKNWEVWIPFQEDLPEFELKN
KIYRKIKNFQITPVLRNDYSGIKLEGPICIYSEEKIKINGVNFGKNFYLIKDLYGTWTLVQKIEFDDYLAGVLPYEIGPN
SPLEALKAQAVIARTWGIFNSDRFNMDKYHLCISTQCQVYKPSEISYKNVQKAIDETSNLILTHENQPINAFYHGSNGGV
SATAGESWQIQDYSYFNSIIDGSKSLNNIFKLPITNEFYLNNFLDFDKEQFYGSNHSLFRWNKKISSLEIKEKLIKNKLI
NINEDVLDLNSIERGSSGRVTKLEIQTDKGNKSIVLVKDDIRRVLNFIPSNLFTINKLNDDLWLLRGGGFGHGVGLSQSG
AIEMAKLGFSYEQILNHYYRNAKLKKFEILSQWKLSN

Sequences:

>Translated_517_residues
MKLKFAFLNLFLGCISLLVINTKFISNAKGEELLKVELHNEIKKGKFLIGLKQYLGGENDSFSEKKNINFTTNKGFVNLI
SSNGIKHKSKQINITWADIPVKNPKTIERIVFGPFASYESAKKQSEKLRDKGFDTTVAYPKNWEVWIPFQEDLPEFELKN
KIYRKIKNFQITPVLRNDYSGIKLEGPICIYSEEKIKINGVNFGKNFYLIKDLYGTWTLVQKIEFDDYLAGVLPYEIGPN
SPLEALKAQAVIARTWGIFNSDRFNMDKYHLCISTQCQVYKPSEISYKNVQKAIDETSNLILTHENQPINAFYHGSNGGV
SATAGESWQIQDYSYFNSIIDGSKSLNNIFKLPITNEFYLNNFLDFDKEQFYGSNHSLFRWNKKISSLEIKEKLIKNKLI
NINEDVLDLNSIERGSSGRVTKLEIQTDKGNKSIVLVKDDIRRVLNFIPSNLFTINKLNDDLWLLRGGGFGHGVGLSQSG
AIEMAKLGFSYEQILNHYYRNAKLKKFEILSQWKLSN
>Mature_517_residues
MKLKFAFLNLFLGCISLLVINTKFISNAKGEELLKVELHNEIKKGKFLIGLKQYLGGENDSFSEKKNINFTTNKGFVNLI
SSNGIKHKSKQINITWADIPVKNPKTIERIVFGPFASYESAKKQSEKLRDKGFDTTVAYPKNWEVWIPFQEDLPEFELKN
KIYRKIKNFQITPVLRNDYSGIKLEGPICIYSEEKIKINGVNFGKNFYLIKDLYGTWTLVQKIEFDDYLAGVLPYEIGPN
SPLEALKAQAVIARTWGIFNSDRFNMDKYHLCISTQCQVYKPSEISYKNVQKAIDETSNLILTHENQPINAFYHGSNGGV
SATAGESWQIQDYSYFNSIIDGSKSLNNIFKLPITNEFYLNNFLDFDKEQFYGSNHSLFRWNKKISSLEIKEKLIKNKLI
NINEDVLDLNSIERGSSGRVTKLEIQTDKGNKSIVLVKDDIRRVLNFIPSNLFTINKLNDDLWLLRGGGFGHGVGLSQSG
AIEMAKLGFSYEQILNHYYRNAKLKKFEILSQWKLSN

Specific function: Might be involved in sporulation [H]

COG id: COG2385

COG function: function code D; Sporulation protein and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013486
- InterPro:   IPR013693 [H]

Pfam domain/function: PF08486 SpoIID [H]

EC number: NA

Molecular weight: Translated: 59307; Mature: 59307

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKFAFLNLFLGCISLLVINTKFISNAKGEELLKVELHNEIKKGKFLIGLKQYLGGEND
CEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHCCEEEEEEHHHHCCCCC
SFSEKKNINFTTNKGFVNLISSNGIKHKSKQINITWADIPVKNPKTIERIVFGPFASYES
CCCCCCCCEEEECCCEEEEEECCCCCCCCCEEEEEEEECCCCCCCHHHHEEECCCCCHHH
AKKQSEKLRDKGFDTTVAYPKNWEVWIPFQEDLPEFELKNKIYRKIKNFQITPVLRNDYS
HHHHHHHHHHCCCCCEEECCCCCEEEECHHHCCCHHHHHHHHHHHHHCCEEEEEEECCCC
GIKLEGPICIYSEEKIKINGVNFGKNFYLIKDLYGTWTLVQKIEFDDYLAGVLPYEIGPN
CEEECCCEEEEECCEEEEEEEECCCCEEEEEECCCCEEEEEEECHHHHHHCCCCCCCCCC
SPLEALKAQAVIARTWGIFNSDRFNMDKYHLCISTQCQVYKPSEISYKNVQKAIDETSNL
CHHHHHHHHHHEEHHCCCCCCCCCCCCEEEEEEECCEEEECCCCCCHHHHHHHHHCCCCE
ILTHENQPINAFYHGSNGGVSATAGESWQIQDYSYFNSIIDGSKSLNNIFKLPITNEFYL
EEEECCCCCEEEEECCCCCEEECCCCCEEECCHHHHHHHHCCCHHHCCEEECCCCCHHHH
NNFLDFDKEQFYGSNHSLFRWNKKISSLEIKEKLIKNKLININEDVLDLNSIERGSSGRV
HHHHCCCHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCE
TKLEIQTDKGNKSIVLVKDDIRRVLNFIPSNLFTINKLNDDLWLLRGGGFGHGVGLSQSG
EEEEEEECCCCCEEEEEHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCC
AIEMAKLGFSYEQILNHYYRNAKLKKFEILSQWKLSN
CEEHHHHCCCHHHHHHHHHHCCCCEEEHHHHHHCCCC
>Mature Secondary Structure
MKLKFAFLNLFLGCISLLVINTKFISNAKGEELLKVELHNEIKKGKFLIGLKQYLGGEND
CEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHCCEEEEEEHHHHCCCCC
SFSEKKNINFTTNKGFVNLISSNGIKHKSKQINITWADIPVKNPKTIERIVFGPFASYES
CCCCCCCCEEEECCCEEEEEECCCCCCCCCEEEEEEEECCCCCCCHHHHEEECCCCCHHH
AKKQSEKLRDKGFDTTVAYPKNWEVWIPFQEDLPEFELKNKIYRKIKNFQITPVLRNDYS
HHHHHHHHHHCCCCCEEECCCCCEEEECHHHCCCHHHHHHHHHHHHHCCEEEEEEECCCC
GIKLEGPICIYSEEKIKINGVNFGKNFYLIKDLYGTWTLVQKIEFDDYLAGVLPYEIGPN
CEEECCCEEEEECCEEEEEEEECCCCEEEEEECCCCEEEEEEECHHHHHHCCCCCCCCCC
SPLEALKAQAVIARTWGIFNSDRFNMDKYHLCISTQCQVYKPSEISYKNVQKAIDETSNL
CHHHHHHHHHHEEHHCCCCCCCCCCCCEEEEEEECCEEEECCCCCCHHHHHHHHHCCCCE
ILTHENQPINAFYHGSNGGVSATAGESWQIQDYSYFNSIIDGSKSLNNIFKLPITNEFYL
EEEECCCCCEEEEECCCCCEEECCCCCEEECCHHHHHHHHCCCHHHCCEEECCCCCHHHH
NNFLDFDKEQFYGSNHSLFRWNKKISSLEIKEKLIKNKLININEDVLDLNSIERGSSGRV
HHHHCCCHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCE
TKLEIQTDKGNKSIVLVKDDIRRVLNFIPSNLFTINKLNDDLWLLRGGGFGHGVGLSQSG
EEEEEEECCCCCEEEEEHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCC
AIEMAKLGFSYEQILNHYYRNAKLKKFEILSQWKLSN
CEEHHHHCCCHHHHHHHHHHCCCCEEEHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA