| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123969383
Identifier: 123969383
GI number: 123969383
Start: 1582222
End: 1582653
Strand: Reverse
Name: 123969383
Synonym: A9601_18511
Alternate gene names: NA
Gene position: 1582653-1582222 (Counterclockwise)
Preceding gene: 123969384
Following gene: 123969381
Centisome position: 94.78
GC content: 31.02
Gene sequence:
>432_bases ATGAAAAGAGTAATTTCTATTGAAGATTTAAAGGGATTATTTACTAAATCTTATGGAACAGATGCACCTACAAAACAAAA GTGGGCTGAATTTTATAATGAGAATGTTATTTTTACAGATCCAACTCAGGAAACAGAGGGCTTAGATTCTTATGTCAAAG CTCAAGAAAAGCTAGTTAAAAGATGTGATGATGTTTTTTTAGAAACTCATGCAATTTCCATAACTGGGGATTGTGGATTT GTTGAATGGACAATGGGTTTAAAAATTATGGGTAAAGAATTTATTTATCCTGGAACTACTCGTTTATTATTTGGCGAAAA TGGATTAATAAAAGAGCACAGAGATTACTTTGATTTTTGTGGTCCAACTTTTGGACCAGTACCTATTTTAGGACCTTTTA TAAGATGGCTTTATAGTAAATTTGTATCTTGA
Upstream 100 bases:
>100_bases GTAGAGCATCTCCTTGCCAAGGAGAATGTCGAGAGTTCGAATCTCTTCATCCGCTTTTAATGTTTGTATCTTTTAAAATA CTTTAAAAGATAATTGCGTA
Downstream 100 bases:
>100_bases TTTTGTTTTTATGAAAAACAGAGTTCTTTATATTTCTCGAATTAATAAATTTTGAGATATGACTTCTTTAAAATCAAATT GAGAATAAAATAATTTTTTA
Product: transcription regulator
Products: NA
Alternate protein names: Transcription Regulator
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MKRVISIEDLKGLFTKSYGTDAPTKQKWAEFYNENVIFTDPTQETEGLDSYVKAQEKLVKRCDDVFLETHAISITGDCGF VEWTMGLKIMGKEFIYPGTTRLLFGENGLIKEHRDYFDFCGPTFGPVPILGPFIRWLYSKFVS
Sequences:
>Translated_143_residues MKRVISIEDLKGLFTKSYGTDAPTKQKWAEFYNENVIFTDPTQETEGLDSYVKAQEKLVKRCDDVFLETHAISITGDCGF VEWTMGLKIMGKEFIYPGTTRLLFGENGLIKEHRDYFDFCGPTFGPVPILGPFIRWLYSKFVS >Mature_143_residues MKRVISIEDLKGLFTKSYGTDAPTKQKWAEFYNENVIFTDPTQETEGLDSYVKAQEKLVKRCDDVFLETHAISITGDCGF VEWTMGLKIMGKEFIYPGTTRLLFGENGLIKEHRDYFDFCGPTFGPVPILGPFIRWLYSKFVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16412; Mature: 16412
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRVISIEDLKGLFTKSYGTDAPTKQKWAEFYNENVIFTDPTQETEGLDSYVKAQEKLVK CCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHH RCDDVFLETHAISITGDCGFVEWTMGLKIMGKEFIYPGTTRLLFGENGLIKEHRDYFDFC HHHHHHHHHEEEEEECCCCEEEHCCCCEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHC GPTFGPVPILGPFIRWLYSKFVS CCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKRVISIEDLKGLFTKSYGTDAPTKQKWAEFYNENVIFTDPTQETEGLDSYVKAQEKLVK CCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHH RCDDVFLETHAISITGDCGFVEWTMGLKIMGKEFIYPGTTRLLFGENGLIKEHRDYFDFC HHHHHHHHHEEEEEECCCCEEEHCCCCEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHC GPTFGPVPILGPFIRWLYSKFVS CCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA