| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is scrK [H]
Identifier: 123969369
GI number: 123969369
Start: 1567711
End: 1568709
Strand: Reverse
Name: scrK [H]
Synonym: A9601_18371
Alternate gene names: 123969369
Gene position: 1568709-1567711 (Counterclockwise)
Preceding gene: 123969371
Following gene: 123969367
Centisome position: 93.94
GC content: 32.33
Gene sequence:
>999_bases ATGAAAAAGAAAAAGGTTATATGTATTGGTGAGGCTTTAATAGACAGAATCAGAAATAAGTCAAATAAGGGATTTACAGA TTTTTTGGGTGGTGCGCCGGCTAATGTCGCTTGTGCATTGAGAAAATTAAAAATAGATTCAATTTTTATGGGAAGTTTGG GTAATGATGATTATGGAAAAAAATTTATTTCGCAATTTGATCAATTGGGAGTTAATTTAGATTTCTTGCAATTAAATAAT GATTCATCTACTCGTGTGGTTAATGTAAATAGGGATCAATTTGGAGATCGTTTTTTTTCAGGCTTTGAGGAAAGTTCTCA TGCATGCTATGCAGACGAAGTTCTTAGCAAGAAATTAATAGAAAAAGAAATTTTAAATTTGGAGAAATCTTTTCTAGAAA TAAAATATTTGGTAACAGGAACGAACTTATTATCATCTCCAATATCAGCAGAGACTATTTTTTTTCTTATTGAACAGGCT AATAAATTTGAAGTCAAAATAGTTATTGATTTGAATTGGAGAGAGGTTTTTTGGGATCATGCAAGTTTCTCATCAGAAAT TAGTAAAGCCGCGAGAGTTAATTTAATCAAGAATTTTTTAAATTATGCAAATGTTTTAAAGCTTGCGAAGGAAGAAGCAA TTTTGTTTTTTGAGGATGAAAACCCCTTGCTAATATCTCAACGACTGTCTAATAGACCAGATGTAATAATAACTGATGGA AAAAATCCTGTTTTATGGAGCATCAACGGATTTCAGGGAATTACCGAAACTCCTACTTCACAAAAAATTGTTGATACAAC CGGGGCAGGCGATGCTTTTCTAGCTGGCTTTATTTCAAAATTAATTTCTTCTGGCTATCCTACAAGTGATTTAGAGATAG AAGATTGCATTAAGTTCGCAGGTGTTTGTGGATTATTAACTTGTCTTGGTGAAGGCGCTATCGAGCAACAGCCATATTAT GAAAAGGTTAATAAATTTTTGGGATCTCTTATTTCGTAG
Upstream 100 bases:
>100_bases TTTAAAGACACTATGTATATGCTTTTAATTAAACTTTAATTCAAAAAAAAATTATTCGTTTTTAATAAATTATTCTTAGT AAAGAAAAAGCGTTCATTTT
Downstream 100 bases:
>100_bases TTTCTTCCATAATCTTTTGCGTAACTAATTTCTATTTTCCAGAAATTATCAATAACTGGTTCTATTAATTCTGGCCATTC AATAACTAAAATAGCTTGTC
Product: putative carbohydrate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MKKKKVICIGEALIDRIRNKSNKGFTDFLGGAPANVACALRKLKIDSIFMGSLGNDDYGKKFISQFDQLGVNLDFLQLNN DSSTRVVNVNRDQFGDRFFSGFEESSHACYADEVLSKKLIEKEILNLEKSFLEIKYLVTGTNLLSSPISAETIFFLIEQA NKFEVKIVIDLNWREVFWDHASFSSEISKAARVNLIKNFLNYANVLKLAKEEAILFFEDENPLLISQRLSNRPDVIITDG KNPVLWSINGFQGITETPTSQKIVDTTGAGDAFLAGFISKLISSGYPTSDLEIEDCIKFAGVCGLLTCLGEGAIEQQPYY EKVNKFLGSLIS
Sequences:
>Translated_332_residues MKKKKVICIGEALIDRIRNKSNKGFTDFLGGAPANVACALRKLKIDSIFMGSLGNDDYGKKFISQFDQLGVNLDFLQLNN DSSTRVVNVNRDQFGDRFFSGFEESSHACYADEVLSKKLIEKEILNLEKSFLEIKYLVTGTNLLSSPISAETIFFLIEQA NKFEVKIVIDLNWREVFWDHASFSSEISKAARVNLIKNFLNYANVLKLAKEEAILFFEDENPLLISQRLSNRPDVIITDG KNPVLWSINGFQGITETPTSQKIVDTTGAGDAFLAGFISKLISSGYPTSDLEIEDCIKFAGVCGLLTCLGEGAIEQQPYY EKVNKFLGSLIS >Mature_332_residues MKKKKVICIGEALIDRIRNKSNKGFTDFLGGAPANVACALRKLKIDSIFMGSLGNDDYGKKFISQFDQLGVNLDFLQLNN DSSTRVVNVNRDQFGDRFFSGFEESSHACYADEVLSKKLIEKEILNLEKSFLEIKYLVTGTNLLSSPISAETIFFLIEQA NKFEVKIVIDLNWREVFWDHASFSSEISKAARVNLIKNFLNYANVLKLAKEEAILFFEDENPLLISQRLSNRPDVIITDG KNPVLWSINGFQGITETPTSQKIVDTTGAGDAFLAGFISKLISSGYPTSDLEIEDCIKFAGVCGLLTCLGEGAIEQQPYY EKVNKFLGSLIS
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
Organism=Escherichia coli, GI87082281, Length=296, Percent_Identity=21.9594594594595, Blast_Score=65, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 - InterPro: IPR002139 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: =2.7.1.4 [H]
Molecular weight: Translated: 37009; Mature: 37009
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKKVICIGEALIDRIRNKSNKGFTDFLGGAPANVACALRKLKIDSIFMGSLGNDDYGK CCCCEEEEECHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHCEEEECCCCCCHHHH KFISQFDQLGVNLDFLQLNNDSSTRVVNVNRDQFGDRFFSGFEESSHACYADEVLSKKLI HHHHHHHHHCCCEEEEEECCCCCCEEEECCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH EKEILNLEKSFLEIKYLVTGTNLLSSPISAETIFFLIEQANKFEVKIVIDLNWREVFWDH HHHHHHHHHHHHEEEEEEECCHHHCCCCCHHHHHEEEECCCCEEEEEEEEECHHHHHHHH ASFSSEISKAARVNLIKNFLNYANVLKLAKEEAILFFEDENPLLISQRLSNRPDVIITDG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEHHHCCCCCEEEECC KNPVLWSINGFQGITETPTSQKIVDTTGAGDAFLAGFISKLISSGYPTSDLEIEDCIKFA CCCEEEEECCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH GVCGLLTCLGEGAIEQQPYYEKVNKFLGSLIS HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MKKKKVICIGEALIDRIRNKSNKGFTDFLGGAPANVACALRKLKIDSIFMGSLGNDDYGK CCCCEEEEECHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHCEEEECCCCCCHHHH KFISQFDQLGVNLDFLQLNNDSSTRVVNVNRDQFGDRFFSGFEESSHACYADEVLSKKLI HHHHHHHHHCCCEEEEEECCCCCCEEEECCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH EKEILNLEKSFLEIKYLVTGTNLLSSPISAETIFFLIEQANKFEVKIVIDLNWREVFWDH HHHHHHHHHHHHEEEEEEECCHHHCCCCCHHHHHEEEECCCCEEEEEEEEECHHHHHHHH ASFSSEISKAARVNLIKNFLNYANVLKLAKEEAILFFEDENPLLISQRLSNRPDVIITDG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEHHHCCCCCEEEECC KNPVLWSINGFQGITETPTSQKIVDTTGAGDAFLAGFISKLISSGYPTSDLEIEDCIKFA CCCEEEEECCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH GVCGLLTCLGEGAIEQQPYYEKVNKFLGSLIS HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1809835 [H]