| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is tyrA [H]
Identifier: 123969304
GI number: 123969304
Start: 1504264
End: 1505103
Strand: Direct
Name: tyrA [H]
Synonym: A9601_17721
Alternate gene names: 123969304
Gene position: 1504264-1505103 (Clockwise)
Preceding gene: 123969301
Following gene: 123969306
Centisome position: 90.08
GC content: 30.95
Gene sequence:
>840_bases ATGAAAATTGGAATAGTAGGATTAGGTTTAATTGGCGGTTCTTTGGGATTAAAACTCCAAAGTCTAAATCATACAATTTA TGGAATAGCAAATAATGAATTTAATGAAAAAAAAGCTAAGGATAAAAAACTTGCAAATTTTGTTAGCTGTGATTTGAGCC TATTAAAAAAATGTGAGCTAATAATTTTGGCATTGCCTATCAAAGATTTGATCAGTCCGTCTCAACAATTAGTCGCATCA ATACCTCAGGAAACAATAATAACTGATGTAGGCTCTGTAAAAGAACCAATTGTAAATACATGGGAAAATTTGCATCCTCT ATTTATTGGATCTCATCCAATGGCAGGAACAGAAAAAAAAGGAGTTGATTCAGGTTTTGAAGGTCTTTTTAAAAATGCAA AATGGATTATTACCCCAACACAAAATAGTGATTTAAATTCAGTCAGAACTATTTCCGAGCTCATAAAATCAATGCATTGT GAAATTTGCCAAGCTTCGCCAAAAGAGCATGATGAAGCAGTATCTCTAATTTCTCATTTGCCTATATTTTTAGCTTCTGC CCTGATAGAAACTGCGCAAACAAAAAATAATCAATCTTTATTAGATCTCACGCAAAAATTAGCTGCTACAGGATTTGCTG ATACTTCGAGAGTTGGCGGAGGCAATGAACAACTAGGTCTAGATTTAGCTATTAATAATCAGATTAATATTCTAAATTCC ATAAATAATTTTAAAAATAAGCTAAACATACTGGAATCTCTTATTAAAGAAAAAAATTGGGATTTACTTTCTAAAAAACT TGCTGAAGCAAAAGAAAACAGACAAAATTTTATAAACTAA
Upstream 100 bases:
>100_bases AGCATTTATAATTAATTTAATTTCAAATACATACAAAATTTATGAACCTAATATACAAAAAATTGGTATCAATATAAGAG GGTCTTGAATTAATCAATCT
Downstream 100 bases:
>100_bases AATTTTTTACACCTTTGGAAGCTAAAATTTGCCTTGAAACCATTAATGCAGACTGACTAACACCTGCAGTCCCCTCTCCT GGATAAATCGAATCTCCACA
Product: arogenate dehydrogenase
Products: NA
Alternate protein names: PDH [H]
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MKIGIVGLGLIGGSLGLKLQSLNHTIYGIANNEFNEKKAKDKKLANFVSCDLSLLKKCELIILALPIKDLISPSQQLVAS IPQETIITDVGSVKEPIVNTWENLHPLFIGSHPMAGTEKKGVDSGFEGLFKNAKWIITPTQNSDLNSVRTISELIKSMHC EICQASPKEHDEAVSLISHLPIFLASALIETAQTKNNQSLLDLTQKLAATGFADTSRVGGGNEQLGLDLAINNQINILNS INNFKNKLNILESLIKEKNWDLLSKKLAEAKENRQNFIN
Sequences:
>Translated_279_residues MKIGIVGLGLIGGSLGLKLQSLNHTIYGIANNEFNEKKAKDKKLANFVSCDLSLLKKCELIILALPIKDLISPSQQLVAS IPQETIITDVGSVKEPIVNTWENLHPLFIGSHPMAGTEKKGVDSGFEGLFKNAKWIITPTQNSDLNSVRTISELIKSMHC EICQASPKEHDEAVSLISHLPIFLASALIETAQTKNNQSLLDLTQKLAATGFADTSRVGGGNEQLGLDLAINNQINILNS INNFKNKLNILESLIKEKNWDLLSKKLAEAKENRQNFIN >Mature_279_residues MKIGIVGLGLIGGSLGLKLQSLNHTIYGIANNEFNEKKAKDKKLANFVSCDLSLLKKCELIILALPIKDLISPSQQLVAS IPQETIITDVGSVKEPIVNTWENLHPLFIGSHPMAGTEKKGVDSGFEGLFKNAKWIITPTQNSDLNSVRTISELIKSMHC EICQASPKEHDEAVSLISHLPIFLASALIETAQTKNNQSLLDLTQKLAATGFADTSRVGGGNEQLGLDLAINNQINILNS INNFKNKLNILESLIKEKNWDLLSKKLAEAKENRQNFIN
Specific function: Unknown
COG id: COG0287
COG function: function code E; Prephenate dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 prephenate/arogenate dehydrogenase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR002912 - InterPro: IPR016040 - InterPro: IPR003099 [H]
Pfam domain/function: PF01842 ACT; PF02153 PDH [H]
EC number: =1.3.1.12 [H]
Molecular weight: Translated: 30546; Mature: 30546
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIGIVGLGLIGGSLGLKLQSLNHTIYGIANNEFNEKKAKDKKLANFVSCDLSLLKKCEL CEEEEEEHHHHCCCCCCEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCE IILALPIKDLISPSQQLVASIPQETIITDVGSVKEPIVNTWENLHPLFIGSHPMAGTEKK EEEEECHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCC GVDSGFEGLFKNAKWIITPTQNSDLNSVRTISELIKSMHCEICQASPKEHDEAVSLISHL CCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH PIFLASALIETAQTKNNQSLLDLTQKLAATGFADTSRVGGGNEQLGLDLAINNQINILNS HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCHHHHHH INNFKNKLNILESLIKEKNWDLLSKKLAEAKENRQNFIN HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKIGIVGLGLIGGSLGLKLQSLNHTIYGIANNEFNEKKAKDKKLANFVSCDLSLLKKCEL CEEEEEEHHHHCCCCCCEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCE IILALPIKDLISPSQQLVASIPQETIITDVGSVKEPIVNTWENLHPLFIGSHPMAGTEKK EEEEECHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCC GVDSGFEGLFKNAKWIITPTQNSDLNSVRTISELIKSMHCEICQASPKEHDEAVSLISHL CCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH PIFLASALIETAQTKNNQSLLDLTQKLAATGFADTSRVGGGNEQLGLDLAINNQINILNS HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCHHHHHH INNFKNKLNILESLIKEKNWDLLSKKLAEAKENRQNFIN HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3106153; 9384377 [H]