| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123969263
Identifier: 123969263
GI number: 123969263
Start: 1477227
End: 1478213
Strand: Reverse
Name: 123969263
Synonym: A9601_17311
Alternate gene names: NA
Gene position: 1478213-1477227 (Counterclockwise)
Preceding gene: 123969264
Following gene: 123969260
Centisome position: 88.52
GC content: 27.46
Gene sequence:
>987_bases ATGAATAATTACTCTTGGTTAGAACAAAAGTTGCATAAATTTGCTCTTTCATCACAATTTATGCGTGAAGTAACTTTTGA TGTCGAAAGTACAAATATTTCCTCTGCAAGTAAAACTGGAAATCATATTTTTATTACAGGACTTGCACGAGCAGGTACAA CAATCTTACTGAATGCAATTTATAAATCTAATTTATTTGCCTCCTTAACGTATTCTGATATGCCATTCGTCCTCGCACCA AATTTGTGGTCTAAAATATCTTTCAATAAAAGACATTCAGAATTTAAGGAAAGAGCACATGGAGACGGAATTAAAGTCTC CACAGAATCACCAGAGGCGTTTGAGGAGGTATTTTGGAAAACTTTTGCAAAAGAAGAGTATGAAGAATTAGAAGATAAGT TTAGAGTTTGTGTAGGAAATATTGTTCATAAGTATAAAAAAAAAAGATACCTTAGTAAGAATAATCAAAACATAAAAAGA GTTAAATTGATTAATTCTATTTTCAGTAAATCAAAAATACTTATTCCTTTTAGAGATCCAATACAGCATGGATATTCCTT GCTGACACAGCATAAAAGATTTATTGAGGAATCTAAAAAAGATAAGTTTATATCAAAATATATGAAATGGATTGGACATA CAGAATTTGGTCCAAATTATGCTCCCATTTATAATGAGAACATAAATTTTGATATTGATTTAGATATTAATCATTGGATA GAACAGTGGTATCTTACATATCATAACGCTTATAAATTCTTAAAGAATAACCAGAACGTACATTTCATTTCTTATGAAAA ACTTTGTTTAAATAAAGAATATTGGTTTCAAATCCAAAAATTACTGAACATAAATAAACCTTATGATTTTGAATTTAAAG AATCAAAACAAAATATTTCATTAAAAATTGATAAAGAGTTGAGAGAAAAAGCATTGTCCTTATATCTTGATTTAAATTGT TTAACTCTTATGAAAAAAGAAGATTAA
Upstream 100 bases:
>100_bases GTTTAGCGGCTTTATTGCTTTTATATTGTCTTGGAAAGGAATTATTGAATCTATATTAATTACATTTTCTTATGCCTACA TTAGAAAACTAATTTTTTAA
Downstream 100 bases:
>100_bases AAATATATGTCGAGAAAGTTCTAATTATTTAATTATTAATTAGTAATTTCAATAATAAGGCCAGTTAATTTCATTTAAGC AAATGGTGGGTAATTTGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MNNYSWLEQKLHKFALSSQFMREVTFDVESTNISSASKTGNHIFITGLARAGTTILLNAIYKSNLFASLTYSDMPFVLAP NLWSKISFNKRHSEFKERAHGDGIKVSTESPEAFEEVFWKTFAKEEYEELEDKFRVCVGNIVHKYKKKRYLSKNNQNIKR VKLINSIFSKSKILIPFRDPIQHGYSLLTQHKRFIEESKKDKFISKYMKWIGHTEFGPNYAPIYNENINFDIDLDINHWI EQWYLTYHNAYKFLKNNQNVHFISYEKLCLNKEYWFQIQKLLNINKPYDFEFKESKQNISLKIDKELREKALSLYLDLNC LTLMKKED
Sequences:
>Translated_328_residues MNNYSWLEQKLHKFALSSQFMREVTFDVESTNISSASKTGNHIFITGLARAGTTILLNAIYKSNLFASLTYSDMPFVLAP NLWSKISFNKRHSEFKERAHGDGIKVSTESPEAFEEVFWKTFAKEEYEELEDKFRVCVGNIVHKYKKKRYLSKNNQNIKR VKLINSIFSKSKILIPFRDPIQHGYSLLTQHKRFIEESKKDKFISKYMKWIGHTEFGPNYAPIYNENINFDIDLDINHWI EQWYLTYHNAYKFLKNNQNVHFISYEKLCLNKEYWFQIQKLLNINKPYDFEFKESKQNISLKIDKELREKALSLYLDLNC LTLMKKED >Mature_328_residues MNNYSWLEQKLHKFALSSQFMREVTFDVESTNISSASKTGNHIFITGLARAGTTILLNAIYKSNLFASLTYSDMPFVLAP NLWSKISFNKRHSEFKERAHGDGIKVSTESPEAFEEVFWKTFAKEEYEELEDKFRVCVGNIVHKYKKKRYLSKNNQNIKR VKLINSIFSKSKILIPFRDPIQHGYSLLTQHKRFIEESKKDKFISKYMKWIGHTEFGPNYAPIYNENINFDIDLDINHWI EQWYLTYHNAYKFLKNNQNVHFISYEKLCLNKEYWFQIQKLLNINKPYDFEFKESKQNISLKIDKELREKALSLYLDLNC LTLMKKED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39078; Mature: 39078
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNYSWLEQKLHKFALSSQFMREVTFDVESTNISSASKTGNHIFITGLARAGTTILLNAI CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHH YKSNLFASLTYSDMPFVLAPNLWSKISFNKRHSEFKERAHGDGIKVSTESPEAFEEVFWK HHCCCEEEEECCCCCEEECCCHHHHCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHH TFAKEEYEELEDKFRVCVGNIVHKYKKKRYLSKNNQNIKRVKLINSIFSKSKILIPFRDP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCH IQHGYSLLTQHKRFIEESKKDKFISKYMKWIGHTEFGPNYAPIYNENINFDIDLDINHWI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCEEEEECHHHHH EQWYLTYHNAYKFLKNNQNVHFISYEKLCLNKEYWFQIQKLLNINKPYDFEFKESKQNIS HHHHHHHHHHHHHHHCCCCEEEEEHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEE LKIDKELREKALSLYLDLNCLTLMKKED EEECHHHHHHHHHHHCCCHHEEEEECCC >Mature Secondary Structure MNNYSWLEQKLHKFALSSQFMREVTFDVESTNISSASKTGNHIFITGLARAGTTILLNAI CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHH YKSNLFASLTYSDMPFVLAPNLWSKISFNKRHSEFKERAHGDGIKVSTESPEAFEEVFWK HHCCCEEEEECCCCCEEECCCHHHHCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHH TFAKEEYEELEDKFRVCVGNIVHKYKKKRYLSKNNQNIKRVKLINSIFSKSKILIPFRDP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCH IQHGYSLLTQHKRFIEESKKDKFISKYMKWIGHTEFGPNYAPIYNENINFDIDLDINHWI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCEEEEECHHHHH EQWYLTYHNAYKFLKNNQNVHFISYEKLCLNKEYWFQIQKLLNINKPYDFEFKESKQNIS HHHHHHHHHHHHHHHCCCCEEEEEHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEE LKIDKELREKALSLYLDLNCLTLMKKED EEECHHHHHHHHHHHCCCHHEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA