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The map label for this gene is arnC [H]

Identifier: 123969258

GI number: 123969258

Start: 1468350

End: 1469312

Strand: Reverse

Name: arnC [H]

Synonym: A9601_17261

Alternate gene names: 123969258

Gene position: 1469312-1468350 (Counterclockwise)

Preceding gene: 123969259

Following gene: 123969256

Centisome position: 87.99

GC content: 29.39

Gene sequence:

>963_bases
ATGTCAGATATTAAACAATTAATTTCTATTGTCATCCCTGTTTTCAATGAAAGTGAAAGTATTGGTTTTTTATTGGATGA
AGTTATAAATGTAATGTCATTACATAAATTTAATTTTGAATTGATTGTTGTAAATGATGGTTCTAAAGATAATACTCAAC
AAGTATTAAAACAATTAATGCTCAAAATTAAAGAATTGTCAGTGATTTCCCTACGCAAAAATTATGGGCAAACTGCAGCA
ATGTCAGCTGGCTTTGATAACTCTAAAGGCGATATTGTCATTACTTTAGATGGTGATTTACAGAATGATCCAAATGACAT
TCCGATATTAATTTCAGAAATTAATAATGGCTACGATTTGATTTGTGGATGGAGGTTTGATAGAAAAGATAAATTAATTA
ATAGAAAGATACCATCAAAAATAGCGAATAAATTAATAGCTCTAGTAACAGGTTTGAAGTTGCATGACTATGGATGTTCA
TTAAAAGCTTTTAAGAAAGAAATAATTGATGATATTAAATTGTATGGAGAACTTCACAGGTTTTTGCCCGTCTTAGCGAA
TATTGAAGGTGCAAGAATCAAAGAAATTAAAGTCAATCATAGAAGCAGGCAATATGGATCTAGCAAATATGGAATAGATA
GAACTTTTAGGGTTTTAATGGATTTACTAACTGTTTGGTTTATGACTAAATTTTTAACAAGACCGATGTATGGATTTGGT
TTCGTTGGAATCATAAGTATTTTGATTAGCCTTGCAATGAGTTCCTATTTGATAGTTTTAAAAATAATGGGTGAGGATAT
TGGAAATCGTCCGCTATTAATGTTTGCATTAATATTGGGAATTACTGGGGTTCAATTATTTAGCTTTGGTTTATTGAGCG
AACTTTTAATTAGAACATATCATGAAAGTCAAAGTCGTCCAATTTATAGAATAAGGTCAATAAGTAATGCCAATCAAAAT
TAA

Upstream 100 bases:

>100_bases
CTCATTTAAATAACTCAAATCACCACAGATGTGGTGATTTTTTTTGTTTAATTTTAATGTTGTAAATTAAGTTAAAATTA
TATAAACATATCAAATATAA

Downstream 100 bases:

>100_bases
ATTTTTACTTGAATTTTCTTATTAATAAAGCTGAAAGTTTAACCACTTCAGGAGACATATCTCTTAAACCTTGTCGTAAA
ATTGATAATGTTGATTTGTC

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MSDIKQLISIVIPVFNESESIGFLLDEVINVMSLHKFNFELIVVNDGSKDNTQQVLKQLMLKIKELSVISLRKNYGQTAA
MSAGFDNSKGDIVITLDGDLQNDPNDIPILISEINNGYDLICGWRFDRKDKLINRKIPSKIANKLIALVTGLKLHDYGCS
LKAFKKEIIDDIKLYGELHRFLPVLANIEGARIKEIKVNHRSRQYGSSKYGIDRTFRVLMDLLTVWFMTKFLTRPMYGFG
FVGIISILISLAMSSYLIVLKIMGEDIGNRPLLMFALILGITGVQLFSFGLLSELLIRTYHESQSRPIYRIRSISNANQN

Sequences:

>Translated_320_residues
MSDIKQLISIVIPVFNESESIGFLLDEVINVMSLHKFNFELIVVNDGSKDNTQQVLKQLMLKIKELSVISLRKNYGQTAA
MSAGFDNSKGDIVITLDGDLQNDPNDIPILISEINNGYDLICGWRFDRKDKLINRKIPSKIANKLIALVTGLKLHDYGCS
LKAFKKEIIDDIKLYGELHRFLPVLANIEGARIKEIKVNHRSRQYGSSKYGIDRTFRVLMDLLTVWFMTKFLTRPMYGFG
FVGIISILISLAMSSYLIVLKIMGEDIGNRPLLMFALILGITGVQLFSFGLLSELLIRTYHESQSRPIYRIRSISNANQN
>Mature_319_residues
SDIKQLISIVIPVFNESESIGFLLDEVINVMSLHKFNFELIVVNDGSKDNTQQVLKQLMLKIKELSVISLRKNYGQTAAM
SAGFDNSKGDIVITLDGDLQNDPNDIPILISEINNGYDLICGWRFDRKDKLINRKIPSKIANKLIALVTGLKLHDYGCSL
KAFKKEIIDDIKLYGELHRFLPVLANIEGARIKEIKVNHRSRQYGSSKYGIDRTFRVLMDLLTVWFMTKFLTRPMYGFGF
VGIISILISLAMSSYLIVLKIMGEDIGNRPLLMFALILGITGVQLFSFGLLSELLIRTYHESQSRPIYRIRSISNANQN

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=234, Percent_Identity=28.6324786324786, Blast_Score=82, Evalue=9e-16,
Organism=Escherichia coli, GI1788588, Length=310, Percent_Identity=34.1935483870968, Blast_Score=191, Evalue=5e-50,
Organism=Escherichia coli, GI1788692, Length=309, Percent_Identity=27.1844660194175, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI1787259, Length=93, Percent_Identity=36.5591397849462, Blast_Score=69, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI71999402, Length=218, Percent_Identity=27.0642201834862, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24585265, Length=235, Percent_Identity=28.0851063829787, Blast_Score=75, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 36283; Mature: 36152

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDIKQLISIVIPVFNESESIGFLLDEVINVMSLHKFNFELIVVNDGSKDNTQQVLKQLM
CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHH
LKIKELSVISLRKNYGQTAAMSAGFDNSKGDIVITLDGDLQNDPNDIPILISEINNGYDL
HHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCEEE
ICGWRFDRKDKLINRKIPSKIANKLIALVTGLKLHDYGCSLKAFKKEIIDDIKLYGELHR
EEECCCCCHHHHHHHCCHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHH
FLPVLANIEGARIKEIKVNHRSRQYGSSKYGIDRTFRVLMDLLTVWFMTKFLTRPMYGFG
HHHHHHCCCCCEEEEEEECCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
FVGIISILISLAMSSYLIVLKIMGEDIGNRPLLMFALILGITGVQLFSFGLLSELLIRTY
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HESQSRPIYRIRSISNANQN
HHCCCCCHHHHHCCCCCCCC
>Mature Secondary Structure 
SDIKQLISIVIPVFNESESIGFLLDEVINVMSLHKFNFELIVVNDGSKDNTQQVLKQLM
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHH
LKIKELSVISLRKNYGQTAAMSAGFDNSKGDIVITLDGDLQNDPNDIPILISEINNGYDL
HHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCEEE
ICGWRFDRKDKLINRKIPSKIANKLIALVTGLKLHDYGCSLKAFKKEIIDDIKLYGELHR
EEECCCCCHHHHHHHCCHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHH
FLPVLANIEGARIKEIKVNHRSRQYGSSKYGIDRTFRVLMDLLTVWFMTKFLTRPMYGFG
HHHHHHCCCCCEEEEEEECCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
FVGIISILISLAMSSYLIVLKIMGEDIGNRPLLMFALILGITGVQLFSFGLLSELLIRTY
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HESQSRPIYRIRSISNANQN
HHCCCCCHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA