| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123969253
Identifier: 123969253
GI number: 123969253
Start: 1465385
End: 1466293
Strand: Reverse
Name: 123969253
Synonym: A9601_17211
Alternate gene names: NA
Gene position: 1466293-1465385 (Counterclockwise)
Preceding gene: 123969255
Following gene: 123969250
Centisome position: 87.81
GC content: 30.25
Gene sequence:
>909_bases ATGTCCTTTTACTATTTAAGTAAAGAGATGGGTCTAGCCCTAAATGATATTTTAGGGAGAGTATGTACTCATAGTAAAGA TTTTTCAAGAGAAGATATTGCTATAACTTGGATTAATTACAAAAGTGAAAATAACAGTGTATTTAAAGGTTTTGGTACGG GTATTAATAATAAAAAAATGGTTTACCCTGCCAGCATAGTCAAGTTGGTTTATGCCCTTGCTGCATTTTATTGGATTAAA AAAGGAAGTTTATTATTATCAGATGAACTTAATGATGCTGTAAGGAAAATGTTGTCTTTCTCAAGTAATAATGCAACAAG CTTCTTAGTTGATTTACTCACAGGAACAACAAGTGGACCTTGTATTGAAGGGGAATTATGGGAAAATTGGAAATATCAAA GAAGTATAATAAATAATTGGCTTCATGATTTAGATTGGGAAGAATTGAGAGGTATAAATTGCTGTCAGAAGACCTGGGAT GATGGACCATATGGTCGTGAAAAAGAATTTTATGGGCATGAAAATAAAAATAGAAACGTTATGAATTCTGATTCAGCCGC AAGGGTTTTGGAGGAAATTATGATTCATATTGATTATCAAAAAAATGACTTAAATTTACGAAGTTTTTTAAAAAGAAATT TAAATAAAGTTGTTCTTAAAAATGATTCTCTTAATCAAATAGATGGTTTTTTGGGTGAAGGATTACCAGAAAGCATTAAT CTTTGGAGTAAAGCAGGCTTAATGTCTGAAGTTAGACATGATTCAGCTTGGTGGACTAATAGTCAATCTCTACACACTTT ATTAGTTGTTTTTTGTAATGGTGAAAAATATTCTAAAGATACTTCCTTTTTACCATTATTAGCCAAAGAAGTATATGAAT TTAATAAGAGATATCCTATTAAGGACTAA
Upstream 100 bases:
>100_bases TTTGATATCCAGAAATATTAACTTTTAATTTCCACCAAATAGTTTTTGAAAAATTAGTTTGTTTAAATAGTGAGATAGGA TTTTTATAACTTTCCATACA
Downstream 100 bases:
>100_bases AGTAAATCGTCTAAGTAATTAGAGTCTAATTTGTCAGTATAGGCTTCATAAGGTAACATCATTACCTCTTCAGAATCTAA ATCATTCATAATCCATTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MSFYYLSKEMGLALNDILGRVCTHSKDFSREDIAITWINYKSENNSVFKGFGTGINNKKMVYPASIVKLVYALAAFYWIK KGSLLLSDELNDAVRKMLSFSSNNATSFLVDLLTGTTSGPCIEGELWENWKYQRSIINNWLHDLDWEELRGINCCQKTWD DGPYGREKEFYGHENKNRNVMNSDSAARVLEEIMIHIDYQKNDLNLRSFLKRNLNKVVLKNDSLNQIDGFLGEGLPESIN LWSKAGLMSEVRHDSAWWTNSQSLHTLLVVFCNGEKYSKDTSFLPLLAKEVYEFNKRYPIKD
Sequences:
>Translated_302_residues MSFYYLSKEMGLALNDILGRVCTHSKDFSREDIAITWINYKSENNSVFKGFGTGINNKKMVYPASIVKLVYALAAFYWIK KGSLLLSDELNDAVRKMLSFSSNNATSFLVDLLTGTTSGPCIEGELWENWKYQRSIINNWLHDLDWEELRGINCCQKTWD DGPYGREKEFYGHENKNRNVMNSDSAARVLEEIMIHIDYQKNDLNLRSFLKRNLNKVVLKNDSLNQIDGFLGEGLPESIN LWSKAGLMSEVRHDSAWWTNSQSLHTLLVVFCNGEKYSKDTSFLPLLAKEVYEFNKRYPIKD >Mature_301_residues SFYYLSKEMGLALNDILGRVCTHSKDFSREDIAITWINYKSENNSVFKGFGTGINNKKMVYPASIVKLVYALAAFYWIKK GSLLLSDELNDAVRKMLSFSSNNATSFLVDLLTGTTSGPCIEGELWENWKYQRSIINNWLHDLDWEELRGINCCQKTWDD GPYGREKEFYGHENKNRNVMNSDSAARVLEEIMIHIDYQKNDLNLRSFLKRNLNKVVLKNDSLNQIDGFLGEGLPESINL WSKAGLMSEVRHDSAWWTNSQSLHTLLVVFCNGEKYSKDTSFLPLLAKEVYEFNKRYPIKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34866; Mature: 34735
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFYYLSKEMGLALNDILGRVCTHSKDFSREDIAITWINYKSENNSVFKGFGTGINNKKM CCEEEECHHHCHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCEEEEECCCCCCCEE VYPASIVKLVYALAAFYWIKKGSLLLSDELNDAVRKMLSFSSNNATSFLVDLLTGTTSGP ECHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC CIEGELWENWKYQRSIINNWLHDLDWEELRGINCCQKTWDDGPYGREKEFYGHENKNRNV EECCHHHHCHHHHHHHHHHHHHCCCHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCC MNSDSAARVLEEIMIHIDYQKNDLNLRSFLKRNLNKVVLKNDSLNQIDGFLGEGLPESIN CCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCHHHH LWSKAGLMSEVRHDSAWWTNSQSLHTLLVVFCNGEKYSKDTSFLPLLAKEVYEFNKRYPI HHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCC KD CC >Mature Secondary Structure SFYYLSKEMGLALNDILGRVCTHSKDFSREDIAITWINYKSENNSVFKGFGTGINNKKM CEEEECHHHCHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCEEEEECCCCCCCEE VYPASIVKLVYALAAFYWIKKGSLLLSDELNDAVRKMLSFSSNNATSFLVDLLTGTTSGP ECHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC CIEGELWENWKYQRSIINNWLHDLDWEELRGINCCQKTWDDGPYGREKEFYGHENKNRNV EECCHHHHCHHHHHHHHHHHHHCCCHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCC MNSDSAARVLEEIMIHIDYQKNDLNLRSFLKRNLNKVVLKNDSLNQIDGFLGEGLPESIN CCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCHHHH LWSKAGLMSEVRHDSAWWTNSQSLHTLLVVFCNGEKYSKDTSFLPLLAKEVYEFNKRYPI HHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCC KD CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA