Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

Click here to switch to the map view.

The map label for this gene is 123969253

Identifier: 123969253

GI number: 123969253

Start: 1465385

End: 1466293

Strand: Reverse

Name: 123969253

Synonym: A9601_17211

Alternate gene names: NA

Gene position: 1466293-1465385 (Counterclockwise)

Preceding gene: 123969255

Following gene: 123969250

Centisome position: 87.81

GC content: 30.25

Gene sequence:

>909_bases
ATGTCCTTTTACTATTTAAGTAAAGAGATGGGTCTAGCCCTAAATGATATTTTAGGGAGAGTATGTACTCATAGTAAAGA
TTTTTCAAGAGAAGATATTGCTATAACTTGGATTAATTACAAAAGTGAAAATAACAGTGTATTTAAAGGTTTTGGTACGG
GTATTAATAATAAAAAAATGGTTTACCCTGCCAGCATAGTCAAGTTGGTTTATGCCCTTGCTGCATTTTATTGGATTAAA
AAAGGAAGTTTATTATTATCAGATGAACTTAATGATGCTGTAAGGAAAATGTTGTCTTTCTCAAGTAATAATGCAACAAG
CTTCTTAGTTGATTTACTCACAGGAACAACAAGTGGACCTTGTATTGAAGGGGAATTATGGGAAAATTGGAAATATCAAA
GAAGTATAATAAATAATTGGCTTCATGATTTAGATTGGGAAGAATTGAGAGGTATAAATTGCTGTCAGAAGACCTGGGAT
GATGGACCATATGGTCGTGAAAAAGAATTTTATGGGCATGAAAATAAAAATAGAAACGTTATGAATTCTGATTCAGCCGC
AAGGGTTTTGGAGGAAATTATGATTCATATTGATTATCAAAAAAATGACTTAAATTTACGAAGTTTTTTAAAAAGAAATT
TAAATAAAGTTGTTCTTAAAAATGATTCTCTTAATCAAATAGATGGTTTTTTGGGTGAAGGATTACCAGAAAGCATTAAT
CTTTGGAGTAAAGCAGGCTTAATGTCTGAAGTTAGACATGATTCAGCTTGGTGGACTAATAGTCAATCTCTACACACTTT
ATTAGTTGTTTTTTGTAATGGTGAAAAATATTCTAAAGATACTTCCTTTTTACCATTATTAGCCAAAGAAGTATATGAAT
TTAATAAGAGATATCCTATTAAGGACTAA

Upstream 100 bases:

>100_bases
TTTGATATCCAGAAATATTAACTTTTAATTTCCACCAAATAGTTTTTGAAAAATTAGTTTGTTTAAATAGTGAGATAGGA
TTTTTATAACTTTCCATACA

Downstream 100 bases:

>100_bases
AGTAAATCGTCTAAGTAATTAGAGTCTAATTTGTCAGTATAGGCTTCATAAGGTAACATCATTACCTCTTCAGAATCTAA
ATCATTCATAATCCATTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 302; Mature: 301

Protein sequence:

>302_residues
MSFYYLSKEMGLALNDILGRVCTHSKDFSREDIAITWINYKSENNSVFKGFGTGINNKKMVYPASIVKLVYALAAFYWIK
KGSLLLSDELNDAVRKMLSFSSNNATSFLVDLLTGTTSGPCIEGELWENWKYQRSIINNWLHDLDWEELRGINCCQKTWD
DGPYGREKEFYGHENKNRNVMNSDSAARVLEEIMIHIDYQKNDLNLRSFLKRNLNKVVLKNDSLNQIDGFLGEGLPESIN
LWSKAGLMSEVRHDSAWWTNSQSLHTLLVVFCNGEKYSKDTSFLPLLAKEVYEFNKRYPIKD

Sequences:

>Translated_302_residues
MSFYYLSKEMGLALNDILGRVCTHSKDFSREDIAITWINYKSENNSVFKGFGTGINNKKMVYPASIVKLVYALAAFYWIK
KGSLLLSDELNDAVRKMLSFSSNNATSFLVDLLTGTTSGPCIEGELWENWKYQRSIINNWLHDLDWEELRGINCCQKTWD
DGPYGREKEFYGHENKNRNVMNSDSAARVLEEIMIHIDYQKNDLNLRSFLKRNLNKVVLKNDSLNQIDGFLGEGLPESIN
LWSKAGLMSEVRHDSAWWTNSQSLHTLLVVFCNGEKYSKDTSFLPLLAKEVYEFNKRYPIKD
>Mature_301_residues
SFYYLSKEMGLALNDILGRVCTHSKDFSREDIAITWINYKSENNSVFKGFGTGINNKKMVYPASIVKLVYALAAFYWIKK
GSLLLSDELNDAVRKMLSFSSNNATSFLVDLLTGTTSGPCIEGELWENWKYQRSIINNWLHDLDWEELRGINCCQKTWDD
GPYGREKEFYGHENKNRNVMNSDSAARVLEEIMIHIDYQKNDLNLRSFLKRNLNKVVLKNDSLNQIDGFLGEGLPESINL
WSKAGLMSEVRHDSAWWTNSQSLHTLLVVFCNGEKYSKDTSFLPLLAKEVYEFNKRYPIKD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34866; Mature: 34735

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFYYLSKEMGLALNDILGRVCTHSKDFSREDIAITWINYKSENNSVFKGFGTGINNKKM
CCEEEECHHHCHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCEEEEECCCCCCCEE
VYPASIVKLVYALAAFYWIKKGSLLLSDELNDAVRKMLSFSSNNATSFLVDLLTGTTSGP
ECHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC
CIEGELWENWKYQRSIINNWLHDLDWEELRGINCCQKTWDDGPYGREKEFYGHENKNRNV
EECCHHHHCHHHHHHHHHHHHHCCCHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCC
MNSDSAARVLEEIMIHIDYQKNDLNLRSFLKRNLNKVVLKNDSLNQIDGFLGEGLPESIN
CCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCHHHH
LWSKAGLMSEVRHDSAWWTNSQSLHTLLVVFCNGEKYSKDTSFLPLLAKEVYEFNKRYPI
HHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCC
KD
CC
>Mature Secondary Structure 
SFYYLSKEMGLALNDILGRVCTHSKDFSREDIAITWINYKSENNSVFKGFGTGINNKKM
CEEEECHHHCHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCEEEEECCCCCCCEE
VYPASIVKLVYALAAFYWIKKGSLLLSDELNDAVRKMLSFSSNNATSFLVDLLTGTTSGP
ECHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC
CIEGELWENWKYQRSIINNWLHDLDWEELRGINCCQKTWDDGPYGREKEFYGHENKNRNV
EECCHHHHCHHHHHHHHHHHHHCCCHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCC
MNSDSAARVLEEIMIHIDYQKNDLNLRSFLKRNLNKVVLKNDSLNQIDGFLGEGLPESIN
CCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCHHHH
LWSKAGLMSEVRHDSAWWTNSQSLHTLLVVFCNGEKYSKDTSFLPLLAKEVYEFNKRYPI
HHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCC
KD
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA