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The map label for this gene is degQ [C]

Identifier: 123969226

GI number: 123969226

Start: 1436996

End: 1438126

Strand: Reverse

Name: degQ [C]

Synonym: A9601_16941

Alternate gene names: 123969226

Gene position: 1438126-1436996 (Counterclockwise)

Preceding gene: 123969231

Following gene: 123969225

Centisome position: 86.12

GC content: 35.9

Gene sequence:

>1131_bases
ATGAAGTATCTCAAGATTAAATTTATTAATTTAATCCAAATATTCATTGTTATTTGTTTTTGCATACTCAATTTCTTTCA
AGATGCTGAAGTTTTAGCTTTAACTTCTTTTGAAAGTCATAATTTCGTATCATCGGCAGTTAAAAATATTGGCCCTGCAG
TTGTAAAAATTGACACTGAGCGCTTGGTAGAGAGGCAACAATTTGATCCTACTTTACTTGACCCTTTATTAAGGGATTTA
CTTGGCGAGCAAGGCATTACTCCTGAAAGGGAGAGAGGACAAGGCTCCGGGGTTATCATTAATGAAAATGGTTTGGTTCT
TACAAACGCTCATGTCGTAGAAAGAGTCGATAATGTTTCAGTTACTTTGGCCGATGGATCTATTTGTGATGGTAAAGTTT
TGGGCACGGATACAGTAACTGATCTTGCTTTAGTAAAAATTGATGAAGATACTTATTCTGGTTTTGCTCCACTTGGAAAT
TCTGAAGATCTTGAAGTTGGGGATTGGGCAATAGCTCTTGGTACTCCCTATGGTCTTGAAAAAACAGTTACTTTAGGGAT
TGTAAGCAGCCTGCATAGAGATATCAGTAGTTTAGGATTTTCAGATAAAAGGTTGGATCTTATTCAGACTGATGCGGCAA
TAAATCCAGGAAATTCTGGGGGACCACTAATAAATGCTAATGGCGAGGTAATTGGAATAAATACATTAGTAAGAAGTGGC
CCTGGTGCTGGTTTAGGTTTTGCGATTCCCATCAATCTAGCTAAAAGTGTTTCTGATCAGCTACTCAAAAATGGAGAAGT
TATTCATCCATATTTAGGGGTACAATTAATTTCTTTAAATCCTAGAATTGCTAAAGAACATAATCTAGATCCCAATTCTT
TAGTGCAATTACCCGAAAGAAATGGAGCTCTTATTCAATCAGTAATACCTAATAGCCCCGCTGAAAAAGCTGGTTTAAGA
AGAGGCGATTTAGTCATAGCAGCCCAAAACATCTCTATAAATGAGCCTAAAACTTTACTAGATGAAGTAGAAAAAGCTCA
GATAGGAAAAGTATTTCTTTTAAATATTGTGAGAGATAATAAAGAGATACAGATAAATATCAGACCAGAACCTCTACCAG
GTTTGACATAA

Upstream 100 bases:

>100_bases
AAAATTTTAAAATTTGCATTTTATGGATGTAAACAAAAAAACAACAATAACCTCTTTCTTCAATTAGATTTACTAGATAA
ACTCAAAAACTTTTAATAAT

Downstream 100 bases:

>100_bases
AGCACCGATTGAAATTTAATAATCTATAACCATTAGAGAAAAAGATTTTGGATTCACAAACTCAAATGAAACAGGTAGTT
GCTGATGCAGCAATAAGGGA

Product: trypsin-like serine protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MKYLKIKFINLIQIFIVICFCILNFFQDAEVLALTSFESHNFVSSAVKNIGPAVVKIDTERLVERQQFDPTLLDPLLRDL
LGEQGITPERERGQGSGVIINENGLVLTNAHVVERVDNVSVTLADGSICDGKVLGTDTVTDLALVKIDEDTYSGFAPLGN
SEDLEVGDWAIALGTPYGLEKTVTLGIVSSLHRDISSLGFSDKRLDLIQTDAAINPGNSGGPLINANGEVIGINTLVRSG
PGAGLGFAIPINLAKSVSDQLLKNGEVIHPYLGVQLISLNPRIAKEHNLDPNSLVQLPERNGALIQSVIPNSPAEKAGLR
RGDLVIAAQNISINEPKTLLDEVEKAQIGKVFLLNIVRDNKEIQINIRPEPLPGLT

Sequences:

>Translated_376_residues
MKYLKIKFINLIQIFIVICFCILNFFQDAEVLALTSFESHNFVSSAVKNIGPAVVKIDTERLVERQQFDPTLLDPLLRDL
LGEQGITPERERGQGSGVIINENGLVLTNAHVVERVDNVSVTLADGSICDGKVLGTDTVTDLALVKIDEDTYSGFAPLGN
SEDLEVGDWAIALGTPYGLEKTVTLGIVSSLHRDISSLGFSDKRLDLIQTDAAINPGNSGGPLINANGEVIGINTLVRSG
PGAGLGFAIPINLAKSVSDQLLKNGEVIHPYLGVQLISLNPRIAKEHNLDPNSLVQLPERNGALIQSVIPNSPAEKAGLR
RGDLVIAAQNISINEPKTLLDEVEKAQIGKVFLLNIVRDNKEIQINIRPEPLPGLT
>Mature_376_residues
MKYLKIKFINLIQIFIVICFCILNFFQDAEVLALTSFESHNFVSSAVKNIGPAVVKIDTERLVERQQFDPTLLDPLLRDL
LGEQGITPERERGQGSGVIINENGLVLTNAHVVERVDNVSVTLADGSICDGKVLGTDTVTDLALVKIDEDTYSGFAPLGN
SEDLEVGDWAIALGTPYGLEKTVTLGIVSSLHRDISSLGFSDKRLDLIQTDAAINPGNSGGPLINANGEVIGINTLVRSG
PGAGLGFAIPINLAKSVSDQLLKNGEVIHPYLGVQLISLNPRIAKEHNLDPNSLVQLPERNGALIQSVIPNSPAEKAGLR
RGDLVIAAQNISINEPKTLLDEVEKAQIGKVFLLNIVRDNKEIQINIRPEPLPGLT

Specific function: Protease With A Shared Specificity With Degp. [C]

COG id: COG0265

COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Homo sapiens, GI4506141, Length=344, Percent_Identity=36.3372093023256, Blast_Score=177, Evalue=1e-44,
Organism=Homo sapiens, GI7019477, Length=341, Percent_Identity=33.7243401759531, Blast_Score=158, Evalue=8e-39,
Organism=Homo sapiens, GI22129776, Length=342, Percent_Identity=33.0409356725146, Blast_Score=156, Evalue=2e-38,
Organism=Homo sapiens, GI24308541, Length=340, Percent_Identity=31.1764705882353, Blast_Score=152, Evalue=6e-37,
Organism=Escherichia coli, GI1789629, Length=320, Percent_Identity=37.8125, Blast_Score=185, Evalue=3e-48,
Organism=Escherichia coli, GI1786356, Length=277, Percent_Identity=39.7111913357401, Blast_Score=182, Evalue=3e-47,
Organism=Escherichia coli, GI1789630, Length=288, Percent_Identity=34.375, Blast_Score=162, Evalue=4e-41,
Organism=Drosophila melanogaster, GI24646839, Length=346, Percent_Identity=33.5260115606936, Blast_Score=160, Evalue=2e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR009003
- InterPro:   IPR001254
- InterPro:   IPR001940 [H]

Pfam domain/function: PF00595 PDZ; PF00089 Trypsin [H]

EC number: 3.4.21.- [C]

Molecular weight: Translated: 40522; Mature: 40522

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYLKIKFINLIQIFIVICFCILNFFQDAEVLALTSFESHNFVSSAVKNIGPAVVKIDTE
CCEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCEEEEECHH
RLVERQQFDPTLLDPLLRDLLGEQGITPERERGQGSGVIINENGLVLTNAHVVERVDNVS
HHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHCCCCCEEEECCCCEEEECHHHHHHCCCCE
VTLADGSICDGKVLGTDTVTDLALVKIDEDTYSGFAPLGNSEDLEVGDWAIALGTPYGLE
EEEECCCCCCCEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCEECCEEEEECCCCCCC
KTVTLGIVSSLHRDISSLGFSDKRLDLIQTDAAINPGNSGGPLINANGEVIGINTLVRSG
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCEEECCCCEEEEEHHHHCC
PGAGLGFAIPINLAKSVSDQLLKNGEVIHPYLGVQLISLNPRIAKEHNLDPNSLVQLPER
CCCCCEEEEEHHHHHHHHHHHHHCCCEEEHHHCEEEEECCCCHHHHCCCCHHHHEECCCC
NGALIQSVIPNSPAEKAGLRRGDLVIAAQNISINEPKTLLDEVEKAQIGKVFLLNIVRDN
CCCEEHHHCCCCCHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCEEEEEEEEECC
KEIQINIRPEPLPGLT
CEEEEEECCCCCCCCC
>Mature Secondary Structure
MKYLKIKFINLIQIFIVICFCILNFFQDAEVLALTSFESHNFVSSAVKNIGPAVVKIDTE
CCEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCEEEEECHH
RLVERQQFDPTLLDPLLRDLLGEQGITPERERGQGSGVIINENGLVLTNAHVVERVDNVS
HHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHCCCCCEEEECCCCEEEECHHHHHHCCCCE
VTLADGSICDGKVLGTDTVTDLALVKIDEDTYSGFAPLGNSEDLEVGDWAIALGTPYGLE
EEEECCCCCCCEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCEECCEEEEECCCCCCC
KTVTLGIVSSLHRDISSLGFSDKRLDLIQTDAAINPGNSGGPLINANGEVIGINTLVRSG
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCEEECCCCEEEEEHHHHCC
PGAGLGFAIPINLAKSVSDQLLKNGEVIHPYLGVQLISLNPRIAKEHNLDPNSLVQLPER
CCCCCEEEEEHHHHHHHHHHHHHCCCEEEHHHCEEEEECCCCHHHHCCCCHHHHEECCCC
NGALIQSVIPNSPAEKAGLRRGDLVIAAQNISINEPKTLLDEVEKAQIGKVFLLNIVRDN
CCCEEHHHCCCCCHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCEEEEEEEEECC
KEIQINIRPEPLPGLT
CEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA