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The map label for this gene is rpiA [H]

Identifier: 123969225

GI number: 123969225

Start: 1436235

End: 1436930

Strand: Reverse

Name: rpiA [H]

Synonym: A9601_16931

Alternate gene names: 123969225

Gene position: 1436930-1436235 (Counterclockwise)

Preceding gene: 123969226

Following gene: 123969223

Centisome position: 86.05

GC content: 34.91

Gene sequence:

>696_bases
ATGAAACAGGTAGTTGCTGATGCAGCAATAAGGGAAGTAAAGAGTGACATGATTCTTGGATTAGGTTCTGGATCTACTGC
TGCGTTAATGATAAAAAGCCTTGCGGATGAAATGCGTTCTGGGAAACTCCAAAATATAAGAGGTGTTGCAACTTCTTTTC
AATCAGAAGTTTTAGCGCTTGAATTGAATATCCCGCTTATCGATTTAGCTTCTGTATCTCAAATTGATTTAGCTATTGAT
GGAGCAGATGAAGTTGATCCGGGATTTCAATTAATTAAAGGAGGAGGAGCATGCCATGTCAGAGAAAAATTAGTAGCATC
TAAATCTGATCAATTGTTGATTGTTGTTGATGAAACTAAACTTGTCCAAAATTTAAATCTATCTTTTCCTTTACCTGTAG
AAGTTCTTCCAAATGCTTGGAAGCAAGTTCAGGAAGTTATTTCAGAAATGAATGGCAGTTCTTCTTTAAGAATGGCTAAT
AAAAAAGCTGGCCCAGTTGTTACTGATCAAGGCAACCTAGTTCTAGATGTTTTATTTAATGATGGTATTAAGAATCCAAA
AGACATTGAAAAAACTATTAATAATATTCCAGGAGTTTTAGAAAATGGATTATTCGTCGATCTTACAGACAAAGTTCTAG
TGGGTAAAATTGAAAATAATACTCCAGTGGTTTACTCACCCTCAAGAGTTAGCTAA

Upstream 100 bases:

>100_bases
ATATCAGACCAGAACCTCTACCAGGTTTGACATAAAGCACCGATTGAAATTTAATAATCTATAACCATTAGAGAAAAAGA
TTTTGGATTCACAAACTCAA

Downstream 100 bases:

>100_bases
TCTTCAAATCTTATTTGTACTGAGTTAGCGTGGCTGTGTAAGCCCTCACTATTAGCAAGATTTATAATATCCGGGCTATT
GATTTTTAAACTTTCTTCAT

Product: ribose-5-phosphate isomerase A

Products: NA

Alternate protein names: Phosphoriboisomerase A; PRI [H]

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MKQVVADAAIREVKSDMILGLGSGSTAALMIKSLADEMRSGKLQNIRGVATSFQSEVLALELNIPLIDLASVSQIDLAID
GADEVDPGFQLIKGGGACHVREKLVASKSDQLLIVVDETKLVQNLNLSFPLPVEVLPNAWKQVQEVISEMNGSSSLRMAN
KKAGPVVTDQGNLVLDVLFNDGIKNPKDIEKTINNIPGVLENGLFVDLTDKVLVGKIENNTPVVYSPSRVS

Sequences:

>Translated_231_residues
MKQVVADAAIREVKSDMILGLGSGSTAALMIKSLADEMRSGKLQNIRGVATSFQSEVLALELNIPLIDLASVSQIDLAID
GADEVDPGFQLIKGGGACHVREKLVASKSDQLLIVVDETKLVQNLNLSFPLPVEVLPNAWKQVQEVISEMNGSSSLRMAN
KKAGPVVTDQGNLVLDVLFNDGIKNPKDIEKTINNIPGVLENGLFVDLTDKVLVGKIENNTPVVYSPSRVS
>Mature_231_residues
MKQVVADAAIREVKSDMILGLGSGSTAALMIKSLADEMRSGKLQNIRGVATSFQSEVLALELNIPLIDLASVSQIDLAID
GADEVDPGFQLIKGGGACHVREKLVASKSDQLLIVVDETKLVQNLNLSFPLPVEVLPNAWKQVQEVISEMNGSSSLRMAN
KKAGPVVTDQGNLVLDVLFNDGIKNPKDIEKTINNIPGVLENGLFVDLTDKVLVGKIENNTPVVYSPSRVS

Specific function: Nonoxidative branch of the pentose phosphate pathway. [C]

COG id: COG0120

COG function: function code G; Ribose 5-phosphate isomerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribose 5-phosphate isomerase family [H]

Homologues:

Organism=Homo sapiens, GI94536842, Length=218, Percent_Identity=39.4495412844037, Blast_Score=151, Evalue=4e-37,
Organism=Escherichia coli, GI1789280, Length=217, Percent_Identity=37.7880184331797, Blast_Score=119, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI17551758, Length=207, Percent_Identity=37.6811594202899, Blast_Score=142, Evalue=1e-34,
Organism=Saccharomyces cerevisiae, GI6324669, Length=233, Percent_Identity=32.1888412017167, Blast_Score=118, Evalue=6e-28,
Organism=Drosophila melanogaster, GI281364072, Length=206, Percent_Identity=42.2330097087379, Blast_Score=142, Evalue=1e-34,

Paralogues:

None

Copy number: 740 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004788
- InterPro:   IPR020672 [H]

Pfam domain/function: PF06026 Rib_5-P_isom_A [H]

EC number: =5.3.1.6 [H]

Molecular weight: Translated: 24728; Mature: 24728

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQVVADAAIREVKSDMILGLGSGSTAALMIKSLADEMRSGKLQNIRGVATSFQSEVLAL
CCHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEE
ELNIPLIDLASVSQIDLAIDGADEVDPGFQLIKGGGACHVREKLVASKSDQLLIVVDETK
EECCCEEECCCCCEEEEEECCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCEEEEECCHH
LVQNLNLSFPLPVEVLPNAWKQVQEVISEMNGSSSLRMANKKAGPVVTDQGNLVLDVLFN
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCEEECCCCEEEEEEEC
DGIKNPKDIEKTINNIPGVLENGLFVDLTDKVLVGKIENNTPVVYSPSRVS
CCCCCHHHHHHHHHHCCHHHHCCEEEEECCCEEEEEECCCCCEEECCCCCC
>Mature Secondary Structure
MKQVVADAAIREVKSDMILGLGSGSTAALMIKSLADEMRSGKLQNIRGVATSFQSEVLAL
CCHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEE
ELNIPLIDLASVSQIDLAIDGADEVDPGFQLIKGGGACHVREKLVASKSDQLLIVVDETK
EECCCEEECCCCCEEEEEECCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCEEEEECCHH
LVQNLNLSFPLPVEVLPNAWKQVQEVISEMNGSSSLRMANKKAGPVVTDQGNLVLDVLFN
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCEEECCCCEEEEEEEC
DGIKNPKDIEKTINNIPGVLENGLFVDLTDKVLVGKIENNTPVVYSPSRVS
CCCCCHHHHHHHHHHCCHHHHCCEEEEECCCEEEEEECCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA