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The map label for this gene is yfjD [C]

Identifier: 123969177

GI number: 123969177

Start: 1390160

End: 1391143

Strand: Direct

Name: yfjD [C]

Synonym: A9601_16451

Alternate gene names: 123969177

Gene position: 1390160-1391143 (Clockwise)

Preceding gene: 123969173

Following gene: 123969178

Centisome position: 83.25

GC content: 32.72

Gene sequence:

>984_bases
ATGGAACCAAGTGTTTACGGTTTAGTAATTCTTATAATTATTATTTTAATTGGGTCTGCATGTTGTTCGGGAGTAGAAGC
TGCTTTTTTAGCTGTAAATTCAATTCGAATTCTAGAGATAGCCTCTAAACAAAAACCAAAGAGTTCTGCAAATCAACTTC
TTAAACTTAGAAAACATCTTGGAAGGACATTAACTGTAATTACTATTACTAATAATGGATTTAACATAATTGGAAGTCTT
ATTTTAGGTGTATATGGAGCATTGGTTATTAATAGTAGTTATGGCCTAACCCTGTTTTCAATTGCTTTTTATATCCTGGT
TGTCTTAGTAGGAGAAGTACTACCCAAGGCCCTTGGTACAAGATTCTCAGTTCAAATAGCATTATTATCAGTTCCTATCT
TGAGAATCTTGCATACTTTAATGAGGCCATTCTTAATATTAATAGAACAAATATTTCCTGTTATTACTGCAGAAAATGAA
ATTTCAACTGATGAAGAAGAAATTAGACAAATGGCAAAAATTGGAAGCCAAAAAGGTTTGATAGAAGCTGATGAGGCAGC
AATGATATTTAAGGTTTTTCAATTAAATGATTTAAAAGCTAAAGATTTAATGATCCCTAGAGTATCAGCACCTTGTCTTG
ATGGTTCTTCGAATCTTGAAGAAATTTCAAAACTTATAATGGCTGACAACTCTCCATGGTGGGTTATTTTGGGAGATAAA
GTTGACAAAATACAAGGGGTAGTTAAGCGTGAAAAAATGTTAGCAGAATTAATTAATGGAGAAAATAAAAAATTATTGTC
AGAAATTTGCGAACCTGTGGACTACATTCCCGAAATGATTAAGGCAGATCAATTATTAACAAGATTTGACAAGAATCATA
AAGGAGTGAAAGTAGTAGTAGATGAATTTGGAGGATTCGTGGGCATTATTGGAGCAGAAGCTGTCCTATCTGTTTTAGCT
GGCTGGTGGAAAAATAAATCATGA

Upstream 100 bases:

>100_bases
AAAACTTTATTTTCAGGTTTAAACATAGATTGTGTATTGGCGTGTTTAAAAAAAAAATGGAAGAATGAATTAATACAGAT
TTAGTACTTAATCTATTTTA

Downstream 100 bases:

>100_bases
AACAATTGAAAATTAATACAAGTTATTTACTATTAAAAAATTGGTGGGAGACTATTGATCTTACCAATTTTGAAAAAAGT
TATTTTAATAGAGAAATAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MEPSVYGLVILIIIILIGSACCSGVEAAFLAVNSIRILEIASKQKPKSSANQLLKLRKHLGRTLTVITITNNGFNIIGSL
ILGVYGALVINSSYGLTLFSIAFYILVVLVGEVLPKALGTRFSVQIALLSVPILRILHTLMRPFLILIEQIFPVITAENE
ISTDEEEIRQMAKIGSQKGLIEADEAAMIFKVFQLNDLKAKDLMIPRVSAPCLDGSSNLEEISKLIMADNSPWWVILGDK
VDKIQGVVKREKMLAELINGENKKLLSEICEPVDYIPEMIKADQLLTRFDKNHKGVKVVVDEFGGFVGIIGAEAVLSVLA
GWWKNKS

Sequences:

>Translated_327_residues
MEPSVYGLVILIIIILIGSACCSGVEAAFLAVNSIRILEIASKQKPKSSANQLLKLRKHLGRTLTVITITNNGFNIIGSL
ILGVYGALVINSSYGLTLFSIAFYILVVLVGEVLPKALGTRFSVQIALLSVPILRILHTLMRPFLILIEQIFPVITAENE
ISTDEEEIRQMAKIGSQKGLIEADEAAMIFKVFQLNDLKAKDLMIPRVSAPCLDGSSNLEEISKLIMADNSPWWVILGDK
VDKIQGVVKREKMLAELINGENKKLLSEICEPVDYIPEMIKADQLLTRFDKNHKGVKVVVDEFGGFVGIIGAEAVLSVLA
GWWKNKS
>Mature_327_residues
MEPSVYGLVILIIIILIGSACCSGVEAAFLAVNSIRILEIASKQKPKSSANQLLKLRKHLGRTLTVITITNNGFNIIGSL
ILGVYGALVINSSYGLTLFSIAFYILVVLVGEVLPKALGTRFSVQIALLSVPILRILHTLMRPFLILIEQIFPVITAENE
ISTDEEEIRQMAKIGSQKGLIEADEAAMIFKVFQLNDLKAKDLMIPRVSAPCLDGSSNLEEISKLIMADNSPWWVILGDK
VDKIQGVVKREKMLAELINGENKKLLSEICEPVDYIPEMIKADQLLTRFDKNHKGVKVVVDEFGGFVGIIGAEAVLSVLA
GWWKNKS

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=325, Percent_Identity=25.5384615384615, Blast_Score=82, Evalue=5e-16,
Organism=Escherichia coli, GI145693175, Length=315, Percent_Identity=24.1269841269841, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1786879, Length=178, Percent_Identity=22.4719101123595, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000644
- InterPro:   IPR002550 [H]

Pfam domain/function: PF00571 CBS; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 35913; Mature: 35913

Theoretical pI: Translated: 7.38; Mature: 7.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPSVYGLVILIIIILIGSACCSGVEAAFLAVNSIRILEIASKQKPKSSANQLLKLRKHL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCCHHHHHHHHHHHHHC
GRTLTVITITNNGFNIIGSLILGVYGALVINSSYGLTLFSIAFYILVVLVGEVLPKALGT
CCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
RFSVQIALLSVPILRILHTLMRPFLILIEQIFPVITAENEISTDEEEIRQMAKIGSQKGL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCC
IEADEAAMIFKVFQLNDLKAKDLMIPRVSAPCLDGSSNLEEISKLIMADNSPWWVILGDK
CCCCCHHHHHHHHHCCCCCHHHEECCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCH
VDKIQGVVKREKMLAELINGENKKLLSEICEPVDYIPEMIKADQLLTRFDKNHKGVKVVV
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEH
DEFGGFVGIIGAEAVLSVLAGWWKNKS
HHHCCCEEHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEPSVYGLVILIIIILIGSACCSGVEAAFLAVNSIRILEIASKQKPKSSANQLLKLRKHL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCCHHHHHHHHHHHHHC
GRTLTVITITNNGFNIIGSLILGVYGALVINSSYGLTLFSIAFYILVVLVGEVLPKALGT
CCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
RFSVQIALLSVPILRILHTLMRPFLILIEQIFPVITAENEISTDEEEIRQMAKIGSQKGL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCC
IEADEAAMIFKVFQLNDLKAKDLMIPRVSAPCLDGSSNLEEISKLIMADNSPWWVILGDK
CCCCCHHHHHHHHHCCCCCHHHEECCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCH
VDKIQGVVKREKMLAELINGENKKLLSEICEPVDYIPEMIKADQLLTRFDKNHKGVKVVV
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEH
DEFGGFVGIIGAEAVLSVLAGWWKNKS
HHHCCCEEHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]