| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is pyrR [H]
Identifier: 123969167
GI number: 123969167
Start: 1381214
End: 1381753
Strand: Reverse
Name: pyrR [H]
Synonym: A9601_16351
Alternate gene names: 123969167
Gene position: 1381753-1381214 (Counterclockwise)
Preceding gene: 123969170
Following gene: 123969165
Centisome position: 82.75
GC content: 31.85
Gene sequence:
>540_bases ATGTCCAAGAAAACAAAAAAAATCGTAATACTTTCTGAAGTTGAGCTTAGAAAGACCGTTTCACGTCTAACTTCCGAAAT TATCGAAAAAGTAAATAACCTGGATAACCTTCTATTGGTTGGTATCCCGACTAGAGGAATTGAGTTGGCCGAAGTTCTTG AAAAAGAATTATTCTTAAAAACAGGTTTAAGAGTTAGCAAAGGAACAATTGATCCAACTTTTTATAGAGATGACCAAAAT AGAGTTGGAACTCGTTTAATAAAAATTACTGATATTCCAACTCCTATTGAAAAAAAAGAAATTCTTTTAATAGATGATGT AATTTACACAGGAAGAACAATTAGAGCTGCTATGGATGCTTTATATTCTTGGGGCAGACCTCAAAGAGTTATGTTATTAG TAATGGTAGATAGAGGTCATAGAGAATTACCTATTCAACCAGATTTTTGTGGTAAAAAAGTGCCTACTAGTAAAATTGAA AGTATTAGTTTACGTTTAAATAGAGTTGATAATGAAGAAGGAGTCTTCTTGAATAGCTAG
Upstream 100 bases:
>100_bases ATTTAGCTTCAAACGTTACTCTTTAACAATTTATATTTAACATAGTTAGCTTTTGCTAATTTATGGAAATAGTTAGATGA CTTTTATTTAGTGATAAATT
Downstream 100 bases:
>100_bases CTTTTAGAAGATATTTCCTAAATTATATTCGCCTAAACATTCATCTTTAATATCAAAACACTTAACTAATAAATCAGCAC TTTCCGTGATTTTAAAAAAA
Product: bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase
Products: NA
Alternate protein names: Pyrimidine operon regulatory protein; Uracil phosphoribosyltransferase; UPRTase [H]
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MSKKTKKIVILSEVELRKTVSRLTSEIIEKVNNLDNLLLVGIPTRGIELAEVLEKELFLKTGLRVSKGTIDPTFYRDDQN RVGTRLIKITDIPTPIEKKEILLIDDVIYTGRTIRAAMDALYSWGRPQRVMLLVMVDRGHRELPIQPDFCGKKVPTSKIE SISLRLNRVDNEEGVFLNS
Sequences:
>Translated_179_residues MSKKTKKIVILSEVELRKTVSRLTSEIIEKVNNLDNLLLVGIPTRGIELAEVLEKELFLKTGLRVSKGTIDPTFYRDDQN RVGTRLIKITDIPTPIEKKEILLIDDVIYTGRTIRAAMDALYSWGRPQRVMLLVMVDRGHRELPIQPDFCGKKVPTSKIE SISLRLNRVDNEEGVFLNS >Mature_178_residues SKKTKKIVILSEVELRKTVSRLTSEIIEKVNNLDNLLLVGIPTRGIELAEVLEKELFLKTGLRVSKGTIDPTFYRDDQNR VGTRLIKITDIPTPIEKKEILLIDDVIYTGRTIRAAMDALYSWGRPQRVMLLVMVDRGHRELPIQPDFCGKKVPTSKIES ISLRLNRVDNEEGVFLNS
Specific function: Displays also a weak uracil phosphoribosyltransferase activity which is not physiologically significant [H]
COG id: COG2065
COG function: function code F; Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000836 - InterPro: IPR023050 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.4.2.9 [H]
Molecular weight: Translated: 20400; Mature: 20269
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKTKKIVILSEVELRKTVSRLTSEIIEKVNNLDNLLLVGIPTRGIELAEVLEKELFLK CCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHH TGLRVSKGTIDPTFYRDDQNRVGTRLIKITDIPTPIEKKEILLIDDVIYTGRTIRAAMDA CCCEEECCCCCCCEEECCCCCCCEEEEEEECCCCCCCCCEEEEEECHHHCCCHHHHHHHH LYSWGRPQRVMLLVMVDRGHRELPIQPDFCGKKVPTSKIESISLRLNRVDNEEGVFLNS HHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHEEEEEEEECCCCCCEEECC >Mature Secondary Structure SKKTKKIVILSEVELRKTVSRLTSEIIEKVNNLDNLLLVGIPTRGIELAEVLEKELFLK CCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHH TGLRVSKGTIDPTFYRDDQNRVGTRLIKITDIPTPIEKKEILLIDDVIYTGRTIRAAMDA CCCEEECCCCCCCEEECCCCCCCEEEEEEECCCCCCCCCEEEEEECHHHCCCHHHHHHHH LYSWGRPQRVMLLVMVDRGHRELPIQPDFCGKKVPTSKIESISLRLNRVDNEEGVFLNS HHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHEEEEEEEECCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA