Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

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The map label for this gene is 123969160

Identifier: 123969160

GI number: 123969160

Start: 1375872

End: 1376393

Strand: Reverse

Name: 123969160

Synonym: A9601_16281

Alternate gene names: NA

Gene position: 1376393-1375872 (Counterclockwise)

Preceding gene: 123969163

Following gene: 123969159

Centisome position: 82.42

GC content: 30.84

Gene sequence:

>522_bases
TTGACAAAGAGACATCAGTTAAATATCAACATAGATGAGGCTTTATTAAAGCAACTAAAATTACTCGCATTGTCTGAGGA
TTTAGCTTTAAGTGTTTTTATAAGAAATTCGCTTAGAAAAATAGTTTCTAGTAAAAAAGAAGATTTTCCAAATAAGAAAA
ATCCCTTTTCGGAAATGGACGCCTTGAATTGCACTAATTTCATGAGAGCAATATTTCAAAAGAAGCGCGTTAAAAAGCCT
TATTCATCCGATCTAGATGCATTTAATGAGCTTTTAACTTATATAGAATCTTCCAAGCAATGGACTAAAGATTATACAAA
ACGATTGAGAGAAATTTTGCTTGACGACTCAAATCCTCCTTGGAATGCAAATGAATTAAATGCCATAACAAGAAAAAGAG
AATGTGAATGCCCAATATATTTAGGATTAAAAGATTGGACTGGTTGTAATGAGTATCCTTCTCAAGATTTAATTTGTAAC
TTAGGAGGCTCCTTGGTTTTACTTATAGAAAATCAAATTTAA

Upstream 100 bases:

>100_bases
TAATTTATCTGAATCCCAATTTTCATCGTTAAATTATCATTAGGTGGGCCTATTAAAAATCGAATAATTAAGTACAATTA
AATAGATATCATTATCAGGA

Downstream 100 bases:

>100_bases
AAATAAATTCTGATTTGAAATCCTAATAAAAATTAAAAATGAACATTAATTTATGAATATTCAAGTATTTAAAACCAAGA
TTTTTGTCTGAAAGATTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MTKRHQLNINIDEALLKQLKLLALSEDLALSVFIRNSLRKIVSSKKEDFPNKKNPFSEMDALNCTNFMRAIFQKKRVKKP
YSSDLDAFNELLTYIESSKQWTKDYTKRLREILLDDSNPPWNANELNAITRKRECECPIYLGLKDWTGCNEYPSQDLICN
LGGSLVLLIENQI

Sequences:

>Translated_173_residues
MTKRHQLNINIDEALLKQLKLLALSEDLALSVFIRNSLRKIVSSKKEDFPNKKNPFSEMDALNCTNFMRAIFQKKRVKKP
YSSDLDAFNELLTYIESSKQWTKDYTKRLREILLDDSNPPWNANELNAITRKRECECPIYLGLKDWTGCNEYPSQDLICN
LGGSLVLLIENQI
>Mature_172_residues
TKRHQLNINIDEALLKQLKLLALSEDLALSVFIRNSLRKIVSSKKEDFPNKKNPFSEMDALNCTNFMRAIFQKKRVKKPY
SSDLDAFNELLTYIESSKQWTKDYTKRLREILLDDSNPPWNANELNAITRKRECECPIYLGLKDWTGCNEYPSQDLICNL
GGSLVLLIENQI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20102; Mature: 19971

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKRHQLNINIDEALLKQLKLLALSEDLALSVFIRNSLRKIVSSKKEDFPNKKNPFSEMD
CCCCEEECCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
ALNCTNFMRAIFQKKRVKKPYSSDLDAFNELLTYIESSKQWTKDYTKRLREILLDDSNPP
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCC
WNANELNAITRKRECECPIYLGLKDWTGCNEYPSQDLICNLGGSLVLLIENQI
CCCHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCEEECCCCEEEEEECCC
>Mature Secondary Structure 
TKRHQLNINIDEALLKQLKLLALSEDLALSVFIRNSLRKIVSSKKEDFPNKKNPFSEMD
CCCEEECCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
ALNCTNFMRAIFQKKRVKKPYSSDLDAFNELLTYIESSKQWTKDYTKRLREILLDDSNPP
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCC
WNANELNAITRKRECECPIYLGLKDWTGCNEYPSQDLICNLGGSLVLLIENQI
CCCHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCEEECCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA