| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123969126
Identifier: 123969126
GI number: 123969126
Start: 1356970
End: 1357593
Strand: Reverse
Name: 123969126
Synonym: A9601_15941
Alternate gene names: NA
Gene position: 1357593-1356970 (Counterclockwise)
Preceding gene: 123969130
Following gene: 123969123
Centisome position: 81.3
GC content: 32.69
Gene sequence:
>624_bases TTGGATAATAGACTGTTTTATTCGTCAACTCAAAGAAATAGAGACTGCATTGGTGATGTACTCTCCAGAATTATAAAAAA AGGTTCAGTATTGGAAATCGGGAGTGGCAGCGGTGAACATGGAGTGGTTTTTCAAAAACGCTTTCCTGGAATAATTTGGC AAACAAGTGACCCAGAGTTAGTGCATAGAAAAAGTATAAGTTCTTGGATTGAGTATGAAGACCTAACTAAGAATATGCCC CAGCCTCTTGAGATTGATGTAGAAAAAATTCCTTGGAAAATTCCATTGAGATTAGCTCATTCTTTGCAAGGAATAGTCTC TATAAATATGATTCATGTTGCACAGTGGTCTTGTACTGTAGCACTCTTTAGAGAGTCAGGAAAATTACTCAATAAGGGGC AATTTTTGATTTTGTATGGGCCATTTAAAATTTGTAATAAGCATACAAGTGAAAGTAATTATTTTTTCGATAATTCTTTA AAAATGCAAAATGGTCTATGGGGTATTAAAAATCTTGAGGAAGTTTGTGATGAGAGTAAGAAAAATGGTTTTTCTCAAGA GGATATTATTAAAATGCCTGCAAATAATTTTTCGATAATTTACAGAAAAATTTTTGATAAATGA
Upstream 100 bases:
>100_bases GTCTTAAAATAATGTTTTTCAAGACTCCTAAATTAAGAAAGGTTAAATAATCAACGATTTTAGAAATATTCTTTTTATCG AAGCGCCCATTTTTTTAATT
Downstream 100 bases:
>100_bases AATGTAAATATTAATAAGTTTTGCGAATGCAGCATATTAGATGATCAACCTGATAGTTTTTTGCTCCATTCTTTATGCTT TTGATCTAAATCTGAAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MDNRLFYSSTQRNRDCIGDVLSRIIKKGSVLEIGSGSGEHGVVFQKRFPGIIWQTSDPELVHRKSISSWIEYEDLTKNMP QPLEIDVEKIPWKIPLRLAHSLQGIVSINMIHVAQWSCTVALFRESGKLLNKGQFLILYGPFKICNKHTSESNYFFDNSL KMQNGLWGIKNLEEVCDESKKNGFSQEDIIKMPANNFSIIYRKIFDK
Sequences:
>Translated_207_residues MDNRLFYSSTQRNRDCIGDVLSRIIKKGSVLEIGSGSGEHGVVFQKRFPGIIWQTSDPELVHRKSISSWIEYEDLTKNMP QPLEIDVEKIPWKIPLRLAHSLQGIVSINMIHVAQWSCTVALFRESGKLLNKGQFLILYGPFKICNKHTSESNYFFDNSL KMQNGLWGIKNLEEVCDESKKNGFSQEDIIKMPANNFSIIYRKIFDK >Mature_207_residues MDNRLFYSSTQRNRDCIGDVLSRIIKKGSVLEIGSGSGEHGVVFQKRFPGIIWQTSDPELVHRKSISSWIEYEDLTKNMP QPLEIDVEKIPWKIPLRLAHSLQGIVSINMIHVAQWSCTVALFRESGKLLNKGQFLILYGPFKICNKHTSESNYFFDNSL KMQNGLWGIKNLEEVCDESKKNGFSQEDIIKMPANNFSIIYRKIFDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI93102387, Length=203, Percent_Identity=36.4532019704434, Blast_Score=121, Evalue=4e-28, Organism=Homo sapiens, GI93102391, Length=146, Percent_Identity=36.3013698630137, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI71998087, Length=202, Percent_Identity=28.2178217821782, Blast_Score=85, Evalue=2e-17, Organism=Drosophila melanogaster, GI28574095, Length=204, Percent_Identity=30.8823529411765, Blast_Score=114, Evalue=5e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23829; Mature: 23829
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNRLFYSSTQRNRDCIGDVLSRIIKKGSVLEIGSGSGEHGVVFQKRFPGIIWQTSDPEL CCCCEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCEEEECCCCHH VHRKSISSWIEYEDLTKNMPQPLEIDVEKIPWKIPLRLAHSLQGIVSINMIHVAQWSCTV HHHHHHHHHHHHHHHHCCCCCCCEECHHHCCEECHHHHHHHHHHHEEEEEEEEEHHHHHE ALFRESGKLLNKGQFLILYGPFKICNKHTSESNYFFDNSLKMQNGLWGIKNLEEVCDESK EEEHHCCCEECCCCEEEEECCHHHHCCCCCCCCEEECCCEEECCCCCCHHHHHHHHHHHH KNGFSQEDIIKMPANNFSIIYRKIFDK HCCCCCCCEEECCCCCHHHHHHHHHCC >Mature Secondary Structure MDNRLFYSSTQRNRDCIGDVLSRIIKKGSVLEIGSGSGEHGVVFQKRFPGIIWQTSDPEL CCCCEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCEEEECCCCHH VHRKSISSWIEYEDLTKNMPQPLEIDVEKIPWKIPLRLAHSLQGIVSINMIHVAQWSCTV HHHHHHHHHHHHHHHHCCCCCCCEECHHHCCEECHHHHHHHHHHHEEEEEEEEEHHHHHE ALFRESGKLLNKGQFLILYGPFKICNKHTSESNYFFDNSLKMQNGLWGIKNLEEVCDESK EEEHHCCCEECCCCEEEEECCHHHHCCCCCCCCEEECCCEEECCCCCCHHHHHHHHHHHH KNGFSQEDIIKMPANNFSIIYRKIFDK HCCCCCCCEEECCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA