| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
Click here to switch to the map view.
The map label for this gene is 123969107
Identifier: 123969107
GI number: 123969107
Start: 1348186
End: 1349058
Strand: Direct
Name: 123969107
Synonym: A9601_15751
Alternate gene names: NA
Gene position: 1348186-1349058 (Clockwise)
Preceding gene: 123969106
Following gene: 123969108
Centisome position: 80.74
GC content: 27.95
Gene sequence:
>873_bases TTGATTGGAATCCTTTCTGCTTTTGGAGCCGCTACATCTTGGACTTATGCGTGCTGTATTTGGCGCACGCAAACTCAAAA ATATAAATCAATAGATATAAATTTAATAAAAAATATAATAGCTTTTTTAGTTTTTATACCTGCTTTTATTAATCTCAGTT CTATAACAGAATTAAAACACATATTTATCTTATTAATAAGTGGAATAATAGGTATTGGTTTAGGTGATACTTTCTATTTA AAGTCACTACAAACAATTGGTACAAGAAAAACTTTATCTATAGAAACGCTTTCTCCCTTAATAGCTGCTTTGTCAGGAGA AACTTTTATTAATGAAAATTTAGCAACTAAATCATGGGTTGGAATAATCATAGTATCCATTTCGCTATTCATAATTCTCA AAAAAGGGAATAATTTAAAAGAGGAAAATGCACCTTTCTCAGAAAAAAATAACATTAAGATTTTTGCTTTTCCTTTTTTG TCAGTTTTATGTGCAGTTCTTGGAGGTCTTTTTTCAAGGATGGTTTTCCTTCAAAGCAATTTATCTCCTTTCCTTACAAC TGAGATAAGATTATTGGGAGCAATAATTTTTTTGATTAGTCTAAAAGGATTTAATATTAATTTTTTCTTAAAAGACATTG AAAAGAAACAACAAAAAAAATTTTTGATTTCAATACTTCTTGGAACCAATATAGGGATATTGCTACAACAAGTCGTTTTT AAAACCCTTCCCATAGGATTAGGATGGGCTTTATTAAGCACATCTCCAGTAATTTCCTTATTTTTTGCTAAGAATGAGGA AAGAGAAATTACCAAAAAAATAATATTTTTTACTTGTTTTTTATTGTTTGGCTTGACATTAATAATTCTTTAA
Upstream 100 bases:
>100_bases ATCACTTATTCAGTACTTACCGGGGATTTTGATCCTTGTTTATGTATCCTTTTTAGTATTTACTCAATTTATAAAATAAA ATTTCTAAAAATTATTCGTT
Downstream 100 bases:
>100_bases TCTCAGATTTAATGTAAAAAATACTCATGTTAATAGATATTAGATTAAATAAAATTATCCTATAAACACTAAGAACAATG AAAATTTTAAAGAAAAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MIGILSAFGAATSWTYACCIWRTQTQKYKSIDINLIKNIIAFLVFIPAFINLSSITELKHIFILLISGIIGIGLGDTFYL KSLQTIGTRKTLSIETLSPLIAALSGETFINENLATKSWVGIIIVSISLFIILKKGNNLKEENAPFSEKNNIKIFAFPFL SVLCAVLGGLFSRMVFLQSNLSPFLTTEIRLLGAIIFLISLKGFNINFFLKDIEKKQQKKFLISILLGTNIGILLQQVVF KTLPIGLGWALLSTSPVISLFFAKNEEREITKKIIFFTCFLLFGLTLIIL
Sequences:
>Translated_290_residues MIGILSAFGAATSWTYACCIWRTQTQKYKSIDINLIKNIIAFLVFIPAFINLSSITELKHIFILLISGIIGIGLGDTFYL KSLQTIGTRKTLSIETLSPLIAALSGETFINENLATKSWVGIIIVSISLFIILKKGNNLKEENAPFSEKNNIKIFAFPFL SVLCAVLGGLFSRMVFLQSNLSPFLTTEIRLLGAIIFLISLKGFNINFFLKDIEKKQQKKFLISILLGTNIGILLQQVVF KTLPIGLGWALLSTSPVISLFFAKNEEREITKKIIFFTCFLLFGLTLIIL >Mature_290_residues MIGILSAFGAATSWTYACCIWRTQTQKYKSIDINLIKNIIAFLVFIPAFINLSSITELKHIFILLISGIIGIGLGDTFYL KSLQTIGTRKTLSIETLSPLIAALSGETFINENLATKSWVGIIIVSISLFIILKKGNNLKEENAPFSEKNNIKIFAFPFL SVLCAVLGGLFSRMVFLQSNLSPFLTTEIRLLGAIIFLISLKGFNINFFLKDIEKKQQKKFLISILLGTNIGILLQQVVF KTLPIGLGWALLSTSPVISLFFAKNEEREITKKIIFFTCFLLFGLTLIIL
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32315; Mature: 32315
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGILSAFGAATSWTYACCIWRTQTQKYKSIDINLIKNIIAFLVFIPAFINLSSITELKH CCCCHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH IFILLISGIIGIGLGDTFYLKSLQTIGTRKTLSIETLSPLIAALSGETFINENLATKSWV HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCHHHCCCCCHHHHH GIIIVSISLFIILKKGNNLKEENAPFSEKNNIKIFAFPFLSVLCAVLGGLFSRMVFLQSN HHHHHHHHHHEEEECCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCC LSPFLTTEIRLLGAIIFLISLKGFNINFFLKDIEKKQQKKFLISILLGTNIGILLQQVVF CCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH KTLPIGLGWALLSTSPVISLFFAKNEEREITKKIIFFTCFLLFGLTLIIL HHCCCCCCHHHHCCCHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MIGILSAFGAATSWTYACCIWRTQTQKYKSIDINLIKNIIAFLVFIPAFINLSSITELKH CCCCHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH IFILLISGIIGIGLGDTFYLKSLQTIGTRKTLSIETLSPLIAALSGETFINENLATKSWV HHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCHHHCCCCCHHHHH GIIIVSISLFIILKKGNNLKEENAPFSEKNNIKIFAFPFLSVLCAVLGGLFSRMVFLQSN HHHHHHHHHHEEEECCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCC LSPFLTTEIRLLGAIIFLISLKGFNINFFLKDIEKKQQKKFLISILLGTNIGILLQQVVF CCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH KTLPIGLGWALLSTSPVISLFFAKNEEREITKKIIFFTCFLLFGLTLIIL HHCCCCCCHHHHCCCHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA