Click here to switch to the map view.

The map label for this gene is spoIID

Identifier: 123969081

GI number: 123969081

Start: 1328002

End: 1329177

Strand: Reverse

Name: spoIID

Synonym: A9601_15491

Alternate gene names: NA

Gene position: 1329177-1328002 (Counterclockwise)

Preceding gene: 123969084

Following gene: 123969079

Centisome position: 79.6

GC content: 28.91

Gene sequence:

>1176_bases
GTGATACTTAAATTTAAAAATAATTATAGTAAATGTTGCCTGATAAGTATTCTATTTATTTGTGTTTTTCATAGTGAAAG
TGTTTTTGCATCTAAAGAGCCAATAATTAGAGTTTTGATATCAAAAAATAACAATTTAAGGATCAGATCAGATAGATCAA
TTCCTTTAACAATAAATGGGAAATTTTTTTCAAGCAAAAAAATAAAAGGCTTAACCTTGAAAAATGAGAAAAATAGAAAA
ATTTTATATTTTGATAAAAATAAACAAAAAAAATATGACTTAAAAAATAATCAACAATTTAAAATAAGTTCTTCTGATAG
AAGAGGTATATGGGTAGGTCAGAAGAGATTTTCTGGTAAGCTTAATATCTTTGTCCTTGACTCTAAAATATTGGTAGTAA
ATGTTTTAGGAATAGAAAAATACCTCAATAGCGTAGTGGGTTCAGAAATGCCAACAAAATGGCCTATTGAAGCATTAAAG
GCACAAGCAATTGCTTCAAGAACTTATGCTTTAAATCAAAAGGGAAATAATTTATTTGATATAGATTCAACCCAGAAAAA
TCAAGTCTATAATGGCTTAGAGTCTAGAACTTACAAAACTATCAGAGCTGTTAAAAGTACAAGATCTTTGGTTTTAACTT
ATAAAAATAAATTAATTAATGCTTTGTTTCATAGCAGCTCAGGTGGAATGACAGAAAATAGTCAAGATGTATGGAAAAAT
AAATATCCATATTTATCAAGTGTGAAAGATTTTGATAAAAATAATCCAAAATTTAGATGGCACAAAACAATTTCGAGTAA
TCAATTAATAAATTTATTTCCCGAGATTGGAGGTTTAAATAATATAGAGATTCTAGATATTACTGCGACCGGGAGGGTAA
AAAATGTAAATCTTATTGGGGCTTATGGTTCTTATCAAATGTCTGGGGTAGCTTTAAGAAAAAAATTAGGACTCAACAGT
AATTTTGTGAGATTTAGATTTTTTGAGGAAGAATTAAACAACAATACTCCCCAAAAGAGAGGTTTAATAGCTTTTGGACA
GGGATCAGGTCATGGAGTAGGAATGAGTCAATGGGGTGCAAAATATCTGGCGTCTAGAGGCCAAAAAGCTGAAAGAATAC
TAAAGCATTTTTATAGGGGTGTTCAGATTAAACCTTTTAGAAAAGAATACCTATAG

Upstream 100 bases:

>100_bases
GGTGATATTCACTTATTTATGATATTTTTATTTTTATATCTGGATTAAATTTAGACTTTTAGTCAAACTTAGGCAAATTA
AGCATTTGTTTTTAAACAAA

Downstream 100 bases:

>100_bases
AAGTTATTTAGCATTAAGGACTAATTTTGGATTTATATTAGATTGCTCTTTATTTAAGAAGCCTATCCCAAGAAGTGTTT
GTTTGTTATCTATTACTTTT

Product: sporulation protein SpoIID

Products: NA

Alternate protein names: H-34 [H]

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MILKFKNNYSKCCLISILFICVFHSESVFASKEPIIRVLISKNNNLRIRSDRSIPLTINGKFFSSKKIKGLTLKNEKNRK
ILYFDKNKQKKYDLKNNQQFKISSSDRRGIWVGQKRFSGKLNIFVLDSKILVVNVLGIEKYLNSVVGSEMPTKWPIEALK
AQAIASRTYALNQKGNNLFDIDSTQKNQVYNGLESRTYKTIRAVKSTRSLVLTYKNKLINALFHSSSGGMTENSQDVWKN
KYPYLSSVKDFDKNNPKFRWHKTISSNQLINLFPEIGGLNNIEILDITATGRVKNVNLIGAYGSYQMSGVALRKKLGLNS
NFVRFRFFEEELNNNTPQKRGLIAFGQGSGHGVGMSQWGAKYLASRGQKAERILKHFYRGVQIKPFRKEYL

Sequences:

>Translated_391_residues
MILKFKNNYSKCCLISILFICVFHSESVFASKEPIIRVLISKNNNLRIRSDRSIPLTINGKFFSSKKIKGLTLKNEKNRK
ILYFDKNKQKKYDLKNNQQFKISSSDRRGIWVGQKRFSGKLNIFVLDSKILVVNVLGIEKYLNSVVGSEMPTKWPIEALK
AQAIASRTYALNQKGNNLFDIDSTQKNQVYNGLESRTYKTIRAVKSTRSLVLTYKNKLINALFHSSSGGMTENSQDVWKN
KYPYLSSVKDFDKNNPKFRWHKTISSNQLINLFPEIGGLNNIEILDITATGRVKNVNLIGAYGSYQMSGVALRKKLGLNS
NFVRFRFFEEELNNNTPQKRGLIAFGQGSGHGVGMSQWGAKYLASRGQKAERILKHFYRGVQIKPFRKEYL
>Mature_391_residues
MILKFKNNYSKCCLISILFICVFHSESVFASKEPIIRVLISKNNNLRIRSDRSIPLTINGKFFSSKKIKGLTLKNEKNRK
ILYFDKNKQKKYDLKNNQQFKISSSDRRGIWVGQKRFSGKLNIFVLDSKILVVNVLGIEKYLNSVVGSEMPTKWPIEALK
AQAIASRTYALNQKGNNLFDIDSTQKNQVYNGLESRTYKTIRAVKSTRSLVLTYKNKLINALFHSSSGGMTENSQDVWKN
KYPYLSSVKDFDKNNPKFRWHKTISSNQLINLFPEIGGLNNIEILDITATGRVKNVNLIGAYGSYQMSGVALRKKLGLNS
NFVRFRFFEEELNNNTPQKRGLIAFGQGSGHGVGMSQWGAKYLASRGQKAERILKHFYRGVQIKPFRKEYL

Specific function: Might be involved in sporulation [H]

COG id: COG2385

COG function: function code D; Sporulation protein and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013486
- InterPro:   IPR013693 [H]

Pfam domain/function: PF08486 SpoIID [H]

EC number: NA

Molecular weight: Translated: 44771; Mature: 44771

Theoretical pI: Translated: 10.85; Mature: 10.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILKFKNNYSKCCLISILFICVFHSESVFASKEPIIRVLISKNNNLRIRSDRSIPLTING
CEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCEEEECCCCEEEEECC
KFFSSKKIKGLTLKNEKNRKILYFDKNKQKKYDLKNNQQFKISSSDRRGIWVGQKRFSGK
CEECCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCEEEECCCCCCE
LNIFVLDSKILVVNVLGIEKYLNSVVGSEMPTKWPIEALKAQAIASRTYALNQKGNNLFD
EEEEEECCCEEEEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEECCCCCEEEE
IDSTQKNQVYNGLESRTYKTIRAVKSTRSLVLTYKNKLINALFHSSSGGMTENSQDVWKN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHCCCCCCCCCCCHHHHHC
KYPYLSSVKDFDKNNPKFRWHKTISSNQLINLFPEIGGLNNIEILDITATGRVKNVNLIG
CCCCHHHHHHHCCCCCCEEEEEECCCCCCEEECHHCCCCCCEEEEEEEECCCEEEEEEEE
AYGSYQMSGVALRKKLGLNSNFVRFRFFEEELNNNTPQKRGLIAFGQGSGHGVGMSQWGA
CCCCCEECHHHHHHHCCCCCCEEEEEEEHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHH
KYLASRGQKAERILKHFYRGVQIKPFRKEYL
HHHHHCCHHHHHHHHHHHCCCEECCHHHHCC
>Mature Secondary Structure
MILKFKNNYSKCCLISILFICVFHSESVFASKEPIIRVLISKNNNLRIRSDRSIPLTING
CEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCEEEECCCCEEEEECC
KFFSSKKIKGLTLKNEKNRKILYFDKNKQKKYDLKNNQQFKISSSDRRGIWVGQKRFSGK
CEECCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCEEEECCCCCCE
LNIFVLDSKILVVNVLGIEKYLNSVVGSEMPTKWPIEALKAQAIASRTYALNQKGNNLFD
EEEEEECCCEEEEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEECCCCCEEEE
IDSTQKNQVYNGLESRTYKTIRAVKSTRSLVLTYKNKLINALFHSSSGGMTENSQDVWKN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHCCCCCCCCCCCHHHHHC
KYPYLSSVKDFDKNNPKFRWHKTISSNQLINLFPEIGGLNNIEILDITATGRVKNVNLIG
CCCCHHHHHHHCCCCCCEEEEEECCCCCCEEECHHCCCCCCEEEEEEEECCCEEEEEEEE
AYGSYQMSGVALRKKLGLNSNFVRFRFFEEELNNNTPQKRGLIAFGQGSGHGVGMSQWGA
CCCCCEECHHHHHHHCCCCCCEEEEEEEHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHH
KYLASRGQKAERILKHFYRGVQIKPFRKEYL
HHHHHCCHHHHHHHHHHHCCCEECCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA