| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is lpxA [H]
Identifier: 123969067
GI number: 123969067
Start: 1314893
End: 1315735
Strand: Reverse
Name: lpxA [H]
Synonym: A9601_15351
Alternate gene names: 123969067
Gene position: 1315735-1314893 (Counterclockwise)
Preceding gene: 123969068
Following gene: 123969066
Centisome position: 78.79
GC content: 33.57
Gene sequence:
>843_bases ATGGAAAATAAAAATACTGAATCAAAGTCAATCTTTAGTGGTGTTAAAATTCACCCAAACGCTTTTGTTGATCCAAAGGC AGAACTGCATGATGGGGTCATTATCGCTCAAGGAGCTATTATCGGTCCTGATGTGACTATTGGGAAAGGAACGGAGATAG GACCGAATGCTGTTATTACTGGAAGAACTAAAATTGGAATAAACAATAAAGTTTTCCCTAATGTGTTTATAGGACTTGAT CCCCAAGATCTTAAATATAAGGGGGCATTTACCGAAGTAATCATTGGAGATAATAATACTTTTAGAGAATGCGTAACTAT AAATAAGGCAACTGATGAAGGAGAGAAAACTATTATTGGTAATAATAATTTGTTAATGGCTTACTCCCACATTGGCCATA ATTGTGAACTTGCAAATGGGATAGTTTTATCAAATAGTGTTCAAGTTGCAGGCCATGTAAAGATTGAAGAAAAAGCTATT ATTGGTGGCTGTTTAGGTATCCACCAATTTGTACATATTGGATATTTGGCAATGATTGGAGGAATGACAAGAGTAGATAG GGATGTACCTCCTTTTTGTTTGGCAGAAGGACATCCAGGAAGATTAAGAGGTTTGAATAGGATTGGAATTAAAAGAAGTG GTTTGATGGAAAACAAAGATTTTGATTTTAAATTACTTCAAAGTACTTGGAATCTTCTTTTTAAATCTAGCGATACTATT ACAAATTCATTAGAAAAAGCCATGAACAGAGAATTAGATCTTTCATCTTCAAAATTATGTAATTTTTTAAAAGAGTCAAT ATCTAAAGAAAGACGAGGACCAATGCCAGTAGTGAATTTATGA
Upstream 100 bases:
>100_bases ATTAAAAGACAAAGATTTGGCAAAGTTAAAGGTGAGGCTCATGTTGATGGGAAGTTGGTTTGTTCTGGAGAATTAATGTT CTCATTAGTCGACTAAGAAA
Downstream 100 bases:
>100_bases ATAAAAAGATATTTATAAGTACTGGAGAAGTATCTGGTGATTTGCACGGAAGTTTGTTATCAAAAGCATTATTAGAGGAA GCTAAAAAGAAATTCATAGA
Product: UDP-N-acetylglucosamine acyltransferase
Products: NA
Alternate protein names: UDP-N-acetylglucosamine acyltransferase [H]
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MENKNTESKSIFSGVKIHPNAFVDPKAELHDGVIIAQGAIIGPDVTIGKGTEIGPNAVITGRTKIGINNKVFPNVFIGLD PQDLKYKGAFTEVIIGDNNTFRECVTINKATDEGEKTIIGNNNLLMAYSHIGHNCELANGIVLSNSVQVAGHVKIEEKAI IGGCLGIHQFVHIGYLAMIGGMTRVDRDVPPFCLAEGHPGRLRGLNRIGIKRSGLMENKDFDFKLLQSTWNLLFKSSDTI TNSLEKAMNRELDLSSSKLCNFLKESISKERRGPMPVVNL
Sequences:
>Translated_280_residues MENKNTESKSIFSGVKIHPNAFVDPKAELHDGVIIAQGAIIGPDVTIGKGTEIGPNAVITGRTKIGINNKVFPNVFIGLD PQDLKYKGAFTEVIIGDNNTFRECVTINKATDEGEKTIIGNNNLLMAYSHIGHNCELANGIVLSNSVQVAGHVKIEEKAI IGGCLGIHQFVHIGYLAMIGGMTRVDRDVPPFCLAEGHPGRLRGLNRIGIKRSGLMENKDFDFKLLQSTWNLLFKSSDTI TNSLEKAMNRELDLSSSKLCNFLKESISKERRGPMPVVNL >Mature_280_residues MENKNTESKSIFSGVKIHPNAFVDPKAELHDGVIIAQGAIIGPDVTIGKGTEIGPNAVITGRTKIGINNKVFPNVFIGLD PQDLKYKGAFTEVIIGDNNTFRECVTINKATDEGEKTIIGNNNLLMAYSHIGHNCELANGIVLSNSVQVAGHVKIEEKAI IGGCLGIHQFVHIGYLAMIGGMTRVDRDVPPFCLAEGHPGRLRGLNRIGIKRSGLMENKDFDFKLLQSTWNLLFKSSDTI TNSLEKAMNRELDLSSSKLCNFLKESISKERRGPMPVVNL
Specific function: Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell [H]
COG id: COG1043
COG function: function code M; Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family. LpxA subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786378, Length=225, Percent_Identity=39.1111111111111, Blast_Score=160, Evalue=6e-41, Organism=Escherichia coli, GI1786376, Length=225, Percent_Identity=29.7777777777778, Blast_Score=67, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010137 - InterPro: IPR011004 [H]
Pfam domain/function: NA
EC number: =2.3.1.129 [H]
Molecular weight: Translated: 30553; Mature: 30553
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENKNTESKSIFSGVKIHPNAFVDPKAELHDGVIIAQGAIIGPDVTIGKGTEIGPNAVIT CCCCCCCCHHHHCCEEECCCCCCCCCHHHCCCEEEECCEEECCCEEECCCCCCCCCCEEE GRTKIGINNKVFPNVFIGLDPQDLKYKGAFTEVIIGDNNTFRECVTINKATDEGEKTIIG CCEEECCCCCCCCEEEEECCCCCCEECCCEEEEEECCCCCEEEEEEEECCCCCCCEEEEC NNNLLMAYSHIGHNCELANGIVLSNSVQVAGHVKIEEKAIIGGCLGIHQFVHIGYLAMIG CCCEEEEEECCCCCCEECCCEEEECCEEEEEEEEEECCEEHHHHHHHHHHHHHHHHHHHC GMTRVDRDVPPFCLAEGHPGRLRGLNRIGIKRSGLMENKDFDFKLLQSTWNLLFKSSDTI CHHHHCCCCCCEEEECCCCHHHCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHH TNSLEKAMNRELDLSSSKLCNFLKESISKERRGPMPVVNL HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MENKNTESKSIFSGVKIHPNAFVDPKAELHDGVIIAQGAIIGPDVTIGKGTEIGPNAVIT CCCCCCCCHHHHCCEEECCCCCCCCCHHHCCCEEEECCEEECCCEEECCCCCCCCCCEEE GRTKIGINNKVFPNVFIGLDPQDLKYKGAFTEVIIGDNNTFRECVTINKATDEGEKTIIG CCEEECCCCCCCCEEEEECCCCCCEECCCEEEEEECCCCCEEEEEEEECCCCCCCEEEEC NNNLLMAYSHIGHNCELANGIVLSNSVQVAGHVKIEEKAIIGGCLGIHQFVHIGYLAMIG CCCEEEEEECCCCCCEECCCEEEECCEEEEEEEEEECCEEHHHHHHHHHHHHHHHHHHHC GMTRVDRDVPPFCLAEGHPGRLRGLNRIGIKRSGLMENKDFDFKLLQSTWNLLFKSSDTI CHHHHCCCCCCEEEECCCCHHHCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHH TNSLEKAMNRELDLSSSKLCNFLKESISKERRGPMPVVNL HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA