Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

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The map label for this gene is 123968992

Identifier: 123968992

GI number: 123968992

Start: 1244261

End: 1245625

Strand: Reverse

Name: 123968992

Synonym: A9601_14601

Alternate gene names: NA

Gene position: 1245625-1244261 (Counterclockwise)

Preceding gene: 123968993

Following gene: 123968983

Centisome position: 74.59

GC content: 26.59

Gene sequence:

>1365_bases
TTGATTGGTAAAAGTTTTCCTAATTTTCGAAATTTAAAAATTTTTGTTTTTAAAAACATTAGAAAATTTTGGAGTAAGGT
TGATTATCAATTAGTACCACCCCACGAATTCGTTGAAGAAAGTTCTATTGATAGACTTAGAAAAAAATATTTTGTTGGAT
TTCTTAAGACAAGAAAATTAGGCAATCTCATACCGATATTTTGGTACTCAGCAACCTTAATTTTTTCTCCAATCTCATTA
TTAATATATTTGAGTATTAGTCCATTTTTTCCATTAAAAATCGTAAAAATTGATTTATCTCAAATTGGTTCTTTATTATG
GCTAGCATCAATTGCAGCTCAAAAAAAAAATAAATTTTGTAATTTCAATTTTGTAGTATGTTTGCCAAGAATTTTTCAAT
ACCAAAATCAACATATTTTTGATTATCTATCAGAAGAAACTTTTCAAAAATTTGTTTTTGTTAAAGATTTTTGTTTGAGA
TTTTTTTACTCTTCTTTATCTTGGTTCGAATTTTGCTCAATAGATACAAAAGAATTTGAATTTTTTAAAGAGAATCATTT
TTCTGAATTTTCTAAAGAGATTTCAAACTCTATCTCATTTGACATAGAAAAAAAATTAGAAGATATTGAGCTTGATAAAG
CTAGGTTAAACTTTAAAAGTAAGATAAAAAAAAATGGCTTAGTAACCCTTAATTTAAGGAATTCATCATTTTATAAAGAA
GAAAGGAAGTCCCTTAGAAATGTTAGTGGAGTGGATTACTTTGATGTGTGTGTTTATCTATTTCAAAGAGACTATTCCAT
CGCATTTACCCATTCACCTGGAAGTGAACTTCTTAAAAAGCTAGATGCCTTATCTATAACTTATAGAATTTTTGATTCAC
GAGATAAGGTTGGTCAATTTGAAAATTTATTGTCTCTAATATCTTGTAAATATTTTATTGGCAGCTCGACGGGTGCAAGT
GTTATTCCCTTAATGAGAAATATTCCTGTTTTATTTACTAATTCTCACATTCCATTTTGGATGCCTCTAAAAGCAAATGA
TGTGGTTATTTGGAAGAAGTATTTTTCATCTTCTGGGGATCAAATTTCCTTTCAGGAATTTGTAAATTTAGGATTAGATA
TACCTTCTAGATTTTCATCTCTTTTTAAAAAAAAGGAAATAAAACTTGTATCTAATAGTTCAGAAGATCTTTTAATAGCG
TTGAAATTATTTCTAGAGTTGCAGGATCCCTCTGTTAATCGTAATCAAATATTGAAAAAATATTCGGCAAAATCAATAAA
GGATTATAATTTCTTTCAAAGTTATAGATGGACATTTAATTCGGAAGCTGTATTTTTAAAATCAAATATAAAAATTGATT
TATAA

Upstream 100 bases:

>100_bases
TGATATATTACTTAGGAAGTAATAGAATATTTTATTGTAAAAATTTTAATTAGATAATATTCAATTTCTATTTTGATTTT
ATCTCAAAGCTTTATTTATT

Downstream 100 bases:

>100_bases
TTCTGGGAATTGATATTCTTTCCCAGGCACGGTATTATCTTGCCCTCCCTCTTTTAATTCTTCAGAAATAATCATTGTTT
GTCGAATGCAATCATCAATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 454; Mature: 454

Protein sequence:

>454_residues
MIGKSFPNFRNLKIFVFKNIRKFWSKVDYQLVPPHEFVEESSIDRLRKKYFVGFLKTRKLGNLIPIFWYSATLIFSPISL
LIYLSISPFFPLKIVKIDLSQIGSLLWLASIAAQKKNKFCNFNFVVCLPRIFQYQNQHIFDYLSEETFQKFVFVKDFCLR
FFYSSLSWFEFCSIDTKEFEFFKENHFSEFSKEISNSISFDIEKKLEDIELDKARLNFKSKIKKNGLVTLNLRNSSFYKE
ERKSLRNVSGVDYFDVCVYLFQRDYSIAFTHSPGSELLKKLDALSITYRIFDSRDKVGQFENLLSLISCKYFIGSSTGAS
VIPLMRNIPVLFTNSHIPFWMPLKANDVVIWKKYFSSSGDQISFQEFVNLGLDIPSRFSSLFKKKEIKLVSNSSEDLLIA
LKLFLELQDPSVNRNQILKKYSAKSIKDYNFFQSYRWTFNSEAVFLKSNIKIDL

Sequences:

>Translated_454_residues
MIGKSFPNFRNLKIFVFKNIRKFWSKVDYQLVPPHEFVEESSIDRLRKKYFVGFLKTRKLGNLIPIFWYSATLIFSPISL
LIYLSISPFFPLKIVKIDLSQIGSLLWLASIAAQKKNKFCNFNFVVCLPRIFQYQNQHIFDYLSEETFQKFVFVKDFCLR
FFYSSLSWFEFCSIDTKEFEFFKENHFSEFSKEISNSISFDIEKKLEDIELDKARLNFKSKIKKNGLVTLNLRNSSFYKE
ERKSLRNVSGVDYFDVCVYLFQRDYSIAFTHSPGSELLKKLDALSITYRIFDSRDKVGQFENLLSLISCKYFIGSSTGAS
VIPLMRNIPVLFTNSHIPFWMPLKANDVVIWKKYFSSSGDQISFQEFVNLGLDIPSRFSSLFKKKEIKLVSNSSEDLLIA
LKLFLELQDPSVNRNQILKKYSAKSIKDYNFFQSYRWTFNSEAVFLKSNIKIDL
>Mature_454_residues
MIGKSFPNFRNLKIFVFKNIRKFWSKVDYQLVPPHEFVEESSIDRLRKKYFVGFLKTRKLGNLIPIFWYSATLIFSPISL
LIYLSISPFFPLKIVKIDLSQIGSLLWLASIAAQKKNKFCNFNFVVCLPRIFQYQNQHIFDYLSEETFQKFVFVKDFCLR
FFYSSLSWFEFCSIDTKEFEFFKENHFSEFSKEISNSISFDIEKKLEDIELDKARLNFKSKIKKNGLVTLNLRNSSFYKE
ERKSLRNVSGVDYFDVCVYLFQRDYSIAFTHSPGSELLKKLDALSITYRIFDSRDKVGQFENLLSLISCKYFIGSSTGAS
VIPLMRNIPVLFTNSHIPFWMPLKANDVVIWKKYFSSSGDQISFQEFVNLGLDIPSRFSSLFKKKEIKLVSNSSEDLLIA
LKLFLELQDPSVNRNQILKKYSAKSIKDYNFFQSYRWTFNSEAVFLKSNIKIDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53428; Mature: 53428

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGKSFPNFRNLKIFVFKNIRKFWSKVDYQLVPPHEFVEESSIDRLRKKYFVGFLKTRKL
CCCCCCCCCCCEEEEEHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHC
GNLIPIFWYSATLIFSPISLLIYLSISPFFPLKIVKIDLSQIGSLLWLASIAAQKKNKFC
CCEEEHHHHHHHHHHHHHHHHEEEECCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCC
NFNFVVCLPRIFQYQNQHIFDYLSEETFQKFVFVKDFCLRFFYSSLSWFEFCSIDTKEFE
CCCCEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHH
FFKENHFSEFSKEISNSISFDIEKKLEDIELDKARLNFKSKIKKNGLVTLNLRNSSFYKE
HHHHHHHHHHHHHHHCCCCEEHHHHHHHHCHHHHHCCHHHHHCCCCEEEEEECCCHHHHH
ERKSLRNVSGVDYFDVCVYLFQRDYSIAFTHSPGSELLKKLDALSITYRIFDSRDKVGQF
HHHHHHCCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHEEEEEEECCCCHHHHH
ENLLSLISCKYFIGSSTGASVIPLMRNIPVLFTNSHIPFWMPLKANDVVIWKKYFSSSGD
HHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEEECCCCCEEEEECCCCEEEEEHHHCCCCC
QISFQEFVNLGLDIPSRFSSLFKKKEIKLVSNSSEDLLIALKLFLELQDPSVNRNQILKK
EEEHHHHHHCCCCCHHHHHHHHHHHHEEEECCCCCHHHHEEEHHHHCCCCCCCHHHHHHH
YSAKSIKDYNFFQSYRWTFNSEAVFLKSNIKIDL
HHHCCCCCCHHHHHHCEEECCCEEEEECCCEEEC
>Mature Secondary Structure
MIGKSFPNFRNLKIFVFKNIRKFWSKVDYQLVPPHEFVEESSIDRLRKKYFVGFLKTRKL
CCCCCCCCCCCEEEEEHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHC
GNLIPIFWYSATLIFSPISLLIYLSISPFFPLKIVKIDLSQIGSLLWLASIAAQKKNKFC
CCEEEHHHHHHHHHHHHHHHHEEEECCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCC
NFNFVVCLPRIFQYQNQHIFDYLSEETFQKFVFVKDFCLRFFYSSLSWFEFCSIDTKEFE
CCCCEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHH
FFKENHFSEFSKEISNSISFDIEKKLEDIELDKARLNFKSKIKKNGLVTLNLRNSSFYKE
HHHHHHHHHHHHHHHCCCCEEHHHHHHHHCHHHHHCCHHHHHCCCCEEEEEECCCHHHHH
ERKSLRNVSGVDYFDVCVYLFQRDYSIAFTHSPGSELLKKLDALSITYRIFDSRDKVGQF
HHHHHHCCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHEEEEEEECCCCHHHHH
ENLLSLISCKYFIGSSTGASVIPLMRNIPVLFTNSHIPFWMPLKANDVVIWKKYFSSSGD
HHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEEECCCCCEEEEECCCCEEEEEHHHCCCCC
QISFQEFVNLGLDIPSRFSSLFKKKEIKLVSNSSEDLLIALKLFLELQDPSVNRNQILKK
EEEHHHHHHCCCCCHHHHHHHHHHHHEEEECCCCCHHHHEEEHHHHCCCCCCCHHHHHHH
YSAKSIKDYNFFQSYRWTFNSEAVFLKSNIKIDL
HHHCCCCCCHHHHHHCEEECCCEEEEECCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA