Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

Click here to switch to the map view.

The map label for this gene is 123968989

Identifier: 123968989

GI number: 123968989

Start: 1241264

End: 1242235

Strand: Direct

Name: 123968989

Synonym: A9601_14571

Alternate gene names: NA

Gene position: 1241264-1242235 (Clockwise)

Preceding gene: 123968988

Following gene: 123968990

Centisome position: 74.33

GC content: 22.12

Gene sequence:

>972_bases
ATGTCTAATATCGATTTAATTATCAAAAAACATTTAGAAGATACAGGAGAAAAAATAACCCTTATCAAGGAAATTCATAA
ATCTTTAAATGGAAGGCTTTATAAAATAAAATATAAAAATAAAATTTCCATTCTTAAACTTTATAAATCAGAAGATAAAA
TTAGATACCATAGAGAAAAAGAAAGTCTTTATATTTTAAATAAAAACCATTTCGAATTCTGTCCTAAATTATTTTACTTT
AATAATTTTTACAAGTATTTGATTATTGAAGAACTGAAAGCAAATAAACCAATCCCAAATAATAAATTTAAGTTTGATCT
AGCAAAATATATAGAAAATCAGCAAAATTATATTCTTCCTATTGATAAGAATAAAATGATGAATGCTTCTGAAGCTGGTT
TTAGTATATTTGAACATCTAGGAATAGTTAAAAAAAAAGCAAATTTTATTTTAGAAAAACTAACTTCACAAGCTCAAACA
AAAGAAGCTTGTAAATTTATATCACATGAAATTTTCCCATGGCTGAATTCATATGAAGAACAACTAAGATTAAATGATAA
TTACTTTAATAAAATTAAAATTTCAGAAATAATTTTTTCTCAATCAGATATAGGAGTACACAATTCATTTATAAATAATC
AAAAGATTTATACATTTGATTATGAATATGCTGGTTTAGATGATCCCGCAAAAACAATTTGCGACCTATTGATTAATCCT
GATCAGATTATTAACAAAGATGATTTCAATATAGTGTTAGAAAAAATTTCAACTCTTAAAATATTCAAAAATGCAATTGA
TAGATTTAGGATAATCTTACCTATCTATAGATTAAAATGGTTTCTTATAATTTTAAATGGTTATTTAAAAGAAGATAAAC
AAGGATCTGAAGATAGTTTTAAAATTTTAATGAAAGCGTTTGATTATCTTAAAAACAGTGAAGAAATTATTCAAATTATT
AAAGATTTTTAA

Upstream 100 bases:

>100_bases
GAATTAAAGGAATCTTGTATGATCCTTTTAACAAATATGAAAATTACAATTTAGATAAAATTTCTAATTGGACATATATT
TATGATTGTTTTAAGTAACT

Downstream 100 bases:

>100_bases
CCTGAAATTATTTTAAAATGAAAGTTTTATTAACAGGATCAAATGGTTTCTTAGGTGGTAATTTAAAAGATTTTTATATT
AAAAAACCATACTTATTACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 323; Mature: 322

Protein sequence:

>323_residues
MSNIDLIIKKHLEDTGEKITLIKEIHKSLNGRLYKIKYKNKISILKLYKSEDKIRYHREKESLYILNKNHFEFCPKLFYF
NNFYKYLIIEELKANKPIPNNKFKFDLAKYIENQQNYILPIDKNKMMNASEAGFSIFEHLGIVKKKANFILEKLTSQAQT
KEACKFISHEIFPWLNSYEEQLRLNDNYFNKIKISEIIFSQSDIGVHNSFINNQKIYTFDYEYAGLDDPAKTICDLLINP
DQIINKDDFNIVLEKISTLKIFKNAIDRFRIILPIYRLKWFLIILNGYLKEDKQGSEDSFKILMKAFDYLKNSEEIIQII
KDF

Sequences:

>Translated_323_residues
MSNIDLIIKKHLEDTGEKITLIKEIHKSLNGRLYKIKYKNKISILKLYKSEDKIRYHREKESLYILNKNHFEFCPKLFYF
NNFYKYLIIEELKANKPIPNNKFKFDLAKYIENQQNYILPIDKNKMMNASEAGFSIFEHLGIVKKKANFILEKLTSQAQT
KEACKFISHEIFPWLNSYEEQLRLNDNYFNKIKISEIIFSQSDIGVHNSFINNQKIYTFDYEYAGLDDPAKTICDLLINP
DQIINKDDFNIVLEKISTLKIFKNAIDRFRIILPIYRLKWFLIILNGYLKEDKQGSEDSFKILMKAFDYLKNSEEIIQII
KDF
>Mature_322_residues
SNIDLIIKKHLEDTGEKITLIKEIHKSLNGRLYKIKYKNKISILKLYKSEDKIRYHREKESLYILNKNHFEFCPKLFYFN
NFYKYLIIEELKANKPIPNNKFKFDLAKYIENQQNYILPIDKNKMMNASEAGFSIFEHLGIVKKKANFILEKLTSQAQTK
EACKFISHEIFPWLNSYEEQLRLNDNYFNKIKISEIIFSQSDIGVHNSFINNQKIYTFDYEYAGLDDPAKTICDLLINPD
QIINKDDFNIVLEKISTLKIFKNAIDRFRIILPIYRLKWFLIILNGYLKEDKQGSEDSFKILMKAFDYLKNSEEIIQIIK
DF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38529; Mature: 38398

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNIDLIIKKHLEDTGEKITLIKEIHKSLNGRLYKIKYKNKISILKLYKSEDKIRYHREK
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEEEECCCEEEEEEECCCCHHHHHHCC
ESLYILNKNHFEFCPKLFYFNNFYKYLIIEELKANKPIPNNKFKFDLAKYIENQQNYILP
CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEE
IDKNKMMNASEAGFSIFEHLGIVKKKANFILEKLTSQAQTKEACKFISHEIFPWLNSYEE
ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLRLNDNYFNKIKISEIIFSQSDIGVHNSFINNQKIYTFDYEYAGLDDPAKTICDLLINP
HHCCCCCCCCEEEHHHHHCCCCCCCCHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHCCC
DQIINKDDFNIVLEKISTLKIFKNAIDRFRIILPIYRLKWFLIILNGYLKEDKQGSEDSF
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
KILMKAFDYLKNSEEIIQIIKDF
HHHHHHHHHHCCHHHHHHHHHCC
>Mature Secondary Structure 
SNIDLIIKKHLEDTGEKITLIKEIHKSLNGRLYKIKYKNKISILKLYKSEDKIRYHREK
CCHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEEEECCCEEEEEEECCCCHHHHHHCC
ESLYILNKNHFEFCPKLFYFNNFYKYLIIEELKANKPIPNNKFKFDLAKYIENQQNYILP
CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEE
IDKNKMMNASEAGFSIFEHLGIVKKKANFILEKLTSQAQTKEACKFISHEIFPWLNSYEE
ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLRLNDNYFNKIKISEIIFSQSDIGVHNSFINNQKIYTFDYEYAGLDDPAKTICDLLINP
HHCCCCCCCCEEEHHHHHCCCCCCCCHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHCCC
DQIINKDDFNIVLEKISTLKIFKNAIDRFRIILPIYRLKWFLIILNGYLKEDKQGSEDSF
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
KILMKAFDYLKNSEEIIQIIKDF
HHHHHHHHHHCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA