The gene/protein map for NC_008816 is currently unavailable.
Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

Click here to switch to the map view.

The map label for this gene is 123968969

Identifier: 123968969

GI number: 123968969

Start: 1214868

End: 1215122

Strand: Reverse

Name: 123968969

Synonym: A9601_14371

Alternate gene names: NA

Gene position: 1215122-1214868 (Counterclockwise)

Preceding gene: 123968981

Following gene: 123968967

Centisome position: 72.77

GC content: 36.08

Gene sequence:

>255_bases
TTGTCCGATAAGGTTGCTTGTAATTCAGCATTAGCAGTATTTACTGCCGTAACTGGATTATTAGTTGTTCCATCTACTGT
TACTTGTAACGCCGAAAAAGTAGCTCCTGGAGCTAAGTATATATTCTCGCTAAAGGTAAGGATTAATTTACTTCCATCAT
TTGAAATCTCAGAAGTAGTTAATGTTGGATTTGTATCAGTAACCGGCATACCAGGATCAACGATTATTGATTCGTTATTG
TTATTGCCATCTTGA

Upstream 100 bases:

>100_bases
GCTTTGAGAGGTGACGCTGCTTAAGTAATTGCCAGTTGAATCTTGAACCGTTTGGGTGCTATGTGAGTAATCAAGAGTTA
TTTGTTGGCCATAAAGAATT

Downstream 100 bases:

>100_bases
TAACTTAAAACAGTCCTTATTTTTTTACCTACTTCATTCGAAGTGATCGTATAACTAGATTGAGTTCCTACTTCTTCCCA
TTCAGTTGTATTTATTGATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 84; Mature: 83

Protein sequence:

>84_residues
MSDKVACNSALAVFTAVTGLLVVPSTVTCNAEKVAPGAKYIFSLKVRINLLPSFEISEVVNVGFVSVTGIPGSTIIDSLL
LLPS

Sequences:

>Translated_84_residues
MSDKVACNSALAVFTAVTGLLVVPSTVTCNAEKVAPGAKYIFSLKVRINLLPSFEISEVVNVGFVSVTGIPGSTIIDSLL
LLPS
>Mature_83_residues
SDKVACNSALAVFTAVTGLLVVPSTVTCNAEKVAPGAKYIFSLKVRINLLPSFEISEVVNVGFVSVTGIPGSTIIDSLLL
LPS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8695; Mature: 8564

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDKVACNSALAVFTAVTGLLVVPSTVTCNAEKVAPGAKYIFSLKVRINLLPSFEISEVV
CCCCCCCCHHHHHHHHHHHHEECCCEEECCHHHCCCCCEEEEEEEEEEEECCCCCHHHHH
NVGFVSVTGIPGSTIIDSLLLLPS
CCCEEEEECCCCHHHHHHHHCCCC
>Mature Secondary Structure 
SDKVACNSALAVFTAVTGLLVVPSTVTCNAEKVAPGAKYIFSLKVRINLLPSFEISEVV
CCCCCCCHHHHHHHHHHHHEECCCEEECCHHHCCCCCEEEEEEEEEEEECCCCCHHHHH
NVGFVSVTGIPGSTIIDSLLLLPS
CCCEEEEECCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA