Click here to switch to the map view.

The map label for this gene is gumC

Identifier: 123968934

GI number: 123968934

Start: 1170788

End: 1172512

Strand: Direct

Name: gumC

Synonym: A9601_14011

Alternate gene names: NA

Gene position: 1170788-1172512 (Clockwise)

Preceding gene: 123968933

Following gene: 123968951

Centisome position: 70.11

GC content: 25.51

Gene sequence:

>1725_bases
TTGAGTGATATCCTTTTAAAAGAAAGTGAATTTGAAAAAGATGAATTTGATATTAGAAGACTATATGAAATTATTTTTAG
AAATAAAAAAGCTATTGCTTCTATAACCGGAATTAGTGTTTTAGTGAGTGGAATTATTGCATTAAATCTGAAAAAAATTT
GGCAGGGAGAATTTCAAATAGTTTTATCAGATACAAACGTTAATAATAGTCAAAGTCTAGCGAGATCTATTTTGATTGAT
AACTCTCTAATTGGGGATTCTTTAAATATAGGAAGTAATAGAGAGTTAAAGACAGAGTTAGAGGTCTTAAAAAGTCCCTC
CATATTGATGCCTACTTATAATTATGTGTTAGATAATAAAAATAAAAATTGGAAATATGCAGAAAAATGGAGATTTAAAG
AGTGGAGAGAAAATAGTTTTAAATTTGAACTAATGAAAGGTACATCAGCTTTAAATATAAAATTTCGAGATAAAGATAAA
AATATTATCTTACCTGCTTTAAAACAAATTTCCGCATCATATCAAAAGTATTCTGGGAGAGACAGAGAAAGAGAAATCAC
AAATGGTTTAAATTATCTAGTAGATGAGATAAAAAAATTTAAAAAAAAATCAGTTAATTCAAGTACAAAAGCAAGAGAAT
TTGCATTAAAACATGATCTATTATTCATATCCCCAAATCTAATTAGTGATAAAGGAAACTATTCTAATTTAACAAAATCT
GACGTGGAATTAGAAAGAATAACAGCTTCAAATCAAATAAGAAGAATAGATAGTCTCTTATCGCAACTTGATAAGATATA
CAACGAAAATGAACTTAATGTTTTATTTTTGAGTAAAAACTACATTTCTAACTATGGTTCTGAATCTGAACTTAAAGGAG
TTCCACAAGAAATTGATCTTATTAACAATAAATTGGCCGTTCTAAGAACAAACTATAAAGAAAAAAATAGAAATATCCAA
AATCTAATAAATAAAAGGTCAACCCTATTAAAAAGCCTTAAAGAACAATTCAAGAGTTACTTAATAACTAAAAAATTTGA
ACTTAATTCTGAGATAGATGCTAATACTAGAGAAGATGGAATAATTTTAAAATTTAAAGAATTATCTGCAGAATCAATAA
GAGATGAAAATACATTAAGTAATTTAGAAAAATTGAGATTACAGTTTGAATTAGAGAAAAATAAAATTAAAGATCCTTGG
GAGCTTATTACTAGACCTACTCTTTTGGAAGTTCCTGTAGGTCCTAATAAAAAATTATTAATAATGGCTGGAGCAATAGG
GGGGGGTATATTAGGAATTATTTACTCCATATTTTTAGAAAAAAAGAAAAATCTAATTTATAATATTGAAGATATTAACA
GAATATTAAAAATTCCTTTCTTAGATAATTACGTTATAAATTCAAATATAGTATTAGAAAATTCTCTACAATATCTCTCT
AAGATCCTTACAGATAATATTGAAGCAAAATCAATTACTATAATTTCCTCAAAAAGTGTCTCTGAATTGGAATTAAAACT
ATTTATTGATGAGCTTAAAAAACTTACTGGTAAAGTATCAATAAACTATACATTTAATATTTTTGATGCCCAAAAAGTAG
GATTAAAAGTTTTTGTATGTAAACTTGGAGAAGAAACATTTAATGATATAAAAGACTTAAACAAAAAACTTGAGATACTT
AAGATAGATATGATTGGATGGATCAATTTCATTAACGAAACTTGA

Upstream 100 bases:

>100_bases
AATTGAAAATCTATGACTCTTAAATTACTTTGGTATTAGATCTTTAATACTTTATAATTATAAAGATAAGTGCCACAACT
CTAGAGTAAGGAGATTTAAA

Downstream 100 bases:

>100_bases
TAATTTTTTTGAACCTAAATCCTTACTTTTAGAAAAGAAATAAATTTAACTAATGGGAAATTTTTTAGGTTTTGTTTTAC
TTAATTTATATACTTTTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 574; Mature: 573

Protein sequence:

>574_residues
MSDILLKESEFEKDEFDIRRLYEIIFRNKKAIASITGISVLVSGIIALNLKKIWQGEFQIVLSDTNVNNSQSLARSILID
NSLIGDSLNIGSNRELKTELEVLKSPSILMPTYNYVLDNKNKNWKYAEKWRFKEWRENSFKFELMKGTSALNIKFRDKDK
NIILPALKQISASYQKYSGRDREREITNGLNYLVDEIKKFKKKSVNSSTKAREFALKHDLLFISPNLISDKGNYSNLTKS
DVELERITASNQIRRIDSLLSQLDKIYNENELNVLFLSKNYISNYGSESELKGVPQEIDLINNKLAVLRTNYKEKNRNIQ
NLINKRSTLLKSLKEQFKSYLITKKFELNSEIDANTREDGIILKFKELSAESIRDENTLSNLEKLRLQFELEKNKIKDPW
ELITRPTLLEVPVGPNKKLLIMAGAIGGGILGIIYSIFLEKKKNLIYNIEDINRILKIPFLDNYVINSNIVLENSLQYLS
KILTDNIEAKSITIISSKSVSELELKLFIDELKKLTGKVSINYTFNIFDAQKVGLKVFVCKLGEETFNDIKDLNKKLEIL
KIDMIGWINFINET

Sequences:

>Translated_574_residues
MSDILLKESEFEKDEFDIRRLYEIIFRNKKAIASITGISVLVSGIIALNLKKIWQGEFQIVLSDTNVNNSQSLARSILID
NSLIGDSLNIGSNRELKTELEVLKSPSILMPTYNYVLDNKNKNWKYAEKWRFKEWRENSFKFELMKGTSALNIKFRDKDK
NIILPALKQISASYQKYSGRDREREITNGLNYLVDEIKKFKKKSVNSSTKAREFALKHDLLFISPNLISDKGNYSNLTKS
DVELERITASNQIRRIDSLLSQLDKIYNENELNVLFLSKNYISNYGSESELKGVPQEIDLINNKLAVLRTNYKEKNRNIQ
NLINKRSTLLKSLKEQFKSYLITKKFELNSEIDANTREDGIILKFKELSAESIRDENTLSNLEKLRLQFELEKNKIKDPW
ELITRPTLLEVPVGPNKKLLIMAGAIGGGILGIIYSIFLEKKKNLIYNIEDINRILKIPFLDNYVINSNIVLENSLQYLS
KILTDNIEAKSITIISSKSVSELELKLFIDELKKLTGKVSINYTFNIFDAQKVGLKVFVCKLGEETFNDIKDLNKKLEIL
KIDMIGWINFINET
>Mature_573_residues
SDILLKESEFEKDEFDIRRLYEIIFRNKKAIASITGISVLVSGIIALNLKKIWQGEFQIVLSDTNVNNSQSLARSILIDN
SLIGDSLNIGSNRELKTELEVLKSPSILMPTYNYVLDNKNKNWKYAEKWRFKEWRENSFKFELMKGTSALNIKFRDKDKN
IILPALKQISASYQKYSGRDREREITNGLNYLVDEIKKFKKKSVNSSTKAREFALKHDLLFISPNLISDKGNYSNLTKSD
VELERITASNQIRRIDSLLSQLDKIYNENELNVLFLSKNYISNYGSESELKGVPQEIDLINNKLAVLRTNYKEKNRNIQN
LINKRSTLLKSLKEQFKSYLITKKFELNSEIDANTREDGIILKFKELSAESIRDENTLSNLEKLRLQFELEKNKIKDPWE
LITRPTLLEVPVGPNKKLLIMAGAIGGGILGIIYSIFLEKKKNLIYNIEDINRILKIPFLDNYVINSNIVLENSLQYLSK
ILTDNIEAKSITIISSKSVSELELKLFIDELKKLTGKVSINYTFNIFDAQKVGLKVFVCKLGEETFNDIKDLNKKLEILK
IDMIGWINFINET

Specific function: Unknown

COG id: COG3206

COG function: function code M; Uncharacterized protein involved in exopolysaccharide biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66279; Mature: 66147

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDILLKESEFEKDEFDIRRLYEIIFRNKKAIASITGISVLVSGIIALNLKKIWQGEFQI
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
VLSDTNVNNSQSLARSILIDNSLIGDSLNIGSNRELKTELEVLKSPSILMPTYNYVLDNK
EEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCEEEECC
NKNWKYAEKWRFKEWRENSFKFELMKGTSALNIKFRDKDKNIILPALKQISASYQKYSGR
CCCCCHHHHHCCHHHCCCCEEEEEEECCEEEEEEEECCCCCEEHHHHHHHHHHHHHHCCC
DREREITNGLNYLVDEIKKFKKKSVNSSTKAREFALKHDLLFISPNLISDKGNYSNLTKS
CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCEEEECCCEECCCCCCCCCCCC
DVELERITASNQIRRIDSLLSQLDKIYNENELNVLFLSKNYISNYGSESELKGVPQEIDL
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHCCCCCHHHCCCCHHHHH
INNKLAVLRTNYKEKNRNIQNLINKRSTLLKSLKEQFKSYLITKKFELNSEIDANTREDG
HCCCEEEEECCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCC
IILKFKELSAESIRDENTLSNLEKLRLQFELEKNKIKDPWELITRPTLLEVPVGPNKKLL
EEEEEECCCHHHCCCHHHHHHHHHHHEEEEECCCCCCCHHHHHCCCEEEEECCCCCCEEE
IMAGAIGGGILGIIYSIFLEKKKNLIYNIEDINRILKIPFLDNYVINSNIVLENSLQYLS
EEEECCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHEECCCCCCEEECCCEEEHHHHHHHH
KILTDNIEAKSITIISSKSVSELELKLFIDELKKLTGKVSINYTFNIFDAQKVGLKVFVC
HHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCEEEEEEEEEEECCHHCCEEEEEE
KLGEETFNDIKDLNKKLEILKIDMIGWINFINET
ECCHHHHHHHHHHHHHEEEEEEEHHHHHHHHCCC
>Mature Secondary Structure 
SDILLKESEFEKDEFDIRRLYEIIFRNKKAIASITGISVLVSGIIALNLKKIWQGEFQI
CCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
VLSDTNVNNSQSLARSILIDNSLIGDSLNIGSNRELKTELEVLKSPSILMPTYNYVLDNK
EEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCEEEECC
NKNWKYAEKWRFKEWRENSFKFELMKGTSALNIKFRDKDKNIILPALKQISASYQKYSGR
CCCCCHHHHHCCHHHCCCCEEEEEEECCEEEEEEEECCCCCEEHHHHHHHHHHHHHHCCC
DREREITNGLNYLVDEIKKFKKKSVNSSTKAREFALKHDLLFISPNLISDKGNYSNLTKS
CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCEEEECCCEECCCCCCCCCCCC
DVELERITASNQIRRIDSLLSQLDKIYNENELNVLFLSKNYISNYGSESELKGVPQEIDL
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHCCCCCHHHCCCCHHHHH
INNKLAVLRTNYKEKNRNIQNLINKRSTLLKSLKEQFKSYLITKKFELNSEIDANTREDG
HCCCEEEEECCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCC
IILKFKELSAESIRDENTLSNLEKLRLQFELEKNKIKDPWELITRPTLLEVPVGPNKKLL
EEEEEECCCHHHCCCHHHHHHHHHHHEEEEECCCCCCCHHHHHCCCEEEEECCCCCCEEE
IMAGAIGGGILGIIYSIFLEKKKNLIYNIEDINRILKIPFLDNYVINSNIVLENSLQYLS
EEEECCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHEECCCCCCEEECCCEEEHHHHHHHH
KILTDNIEAKSITIISSKSVSELELKLFIDELKKLTGKVSINYTFNIFDAQKVGLKVFVC
HHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCEEEEEEEEEEECCHHCCEEEEEE
KLGEETFNDIKDLNKKLEILKIDMIGWINFINET
ECCHHHHHHHHHHHHHEEEEEEEHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA