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The map label for this gene is rsmI [H]

Identifier: 123968919

GI number: 123968919

Start: 1154046

End: 1154906

Strand: Direct

Name: rsmI [H]

Synonym: A9601_13861

Alternate gene names: 123968919

Gene position: 1154046-1154906 (Clockwise)

Preceding gene: 123968917

Following gene: 123968920

Centisome position: 69.11

GC content: 31.13

Gene sequence:

>861_bases
ATGAATAATAATTCCTCATTATCCCATAGAAAGGAGGAACCGGAAAACGGTATTTTATATATAGTCGGCACTCCAATTGG
GAATCTAAATGATATCTCCCAAAGAGCACTAAATATTCTACAGAATGTTTCTTTTATTGCTTGTGAGGATACAAGACAAA
CAAAAAAGATAATGAATAAGTTCAATATTTCAAATAAACTTATAAGTTTTAATAAACATAATTCTTTAATAAAAATTCCA
AAAATAGTAAAAGATCTTAAGGATGGGAAATCAATTGCCATTGTAAGTGACGCTGGCATGCCAGGGATTTGCGATCCGGG
AGAAGAAATTGCAAGGAGCGTAAAATATGAGGGGATTGATATGATTTGCGTTCCTGGAGCATGTGCTGCAATAACAGCGC
TGGTTTCAAGCGGACTTCCCTCCTCAAGATTTGTATTTGAAGGCTTTCTTCCGAAAAAGAAAATTGATAGAGAAAAAATT
CTTTTAGAGATAAGTAAAAATGAAAAAACAACCATAATTTATGAATCACCTAAGAGACTTAGTAAATTATTAGATGAATT
ACTTAAATTCTGTGGAGGAGATCGAGAAATTATGGTAGCCAGAGAATTAACAAAGAAATTTGAAGAACATGTTGGTCATG
ATATTAATAACGTTATTGAATTTTTCAGAGATAAGGATATTATCGGTGAAATAACAATAGTTATAAAAGGTATAAGAAAA
ACAGATTTCAATCCTAATAAATCAACTATAAAGAAAGATCTCAATGATTTAATAGATGCCGGCCTAAGTTTGTCAGCAGC
ATCAAAGTACTTAGCGAAGAAAAATAGTTTAAAGAAAAGCGAAGTTTATAATTTGATTTAA

Upstream 100 bases:

>100_bases
TAGAGTAATAAAGCAAAACATCTGCTGCTTGCCAGCTGAAAATTCTTATATCATCGATAAGATTATTAATATCAACACCA
GACGGTAATTCAATCATTAA

Downstream 100 bases:

>100_bases
AATTAAATTAAAGTATTAATCTATATGAGCTTATTTATTAAAAAATTTTTATACTCAGCAATTTTCAATTCTTGTTTATT
TGTGCTTCTATTTATTGGGA

Product: putative tetrapyrrole methylase family protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MNNNSSLSHRKEEPENGILYIVGTPIGNLNDISQRALNILQNVSFIACEDTRQTKKIMNKFNISNKLISFNKHNSLIKIP
KIVKDLKDGKSIAIVSDAGMPGICDPGEEIARSVKYEGIDMICVPGACAAITALVSSGLPSSRFVFEGFLPKKKIDREKI
LLEISKNEKTTIIYESPKRLSKLLDELLKFCGGDREIMVARELTKKFEEHVGHDINNVIEFFRDKDIIGEITIVIKGIRK
TDFNPNKSTIKKDLNDLIDAGLSLSAASKYLAKKNSLKKSEVYNLI

Sequences:

>Translated_286_residues
MNNNSSLSHRKEEPENGILYIVGTPIGNLNDISQRALNILQNVSFIACEDTRQTKKIMNKFNISNKLISFNKHNSLIKIP
KIVKDLKDGKSIAIVSDAGMPGICDPGEEIARSVKYEGIDMICVPGACAAITALVSSGLPSSRFVFEGFLPKKKIDREKI
LLEISKNEKTTIIYESPKRLSKLLDELLKFCGGDREIMVARELTKKFEEHVGHDINNVIEFFRDKDIIGEITIVIKGIRK
TDFNPNKSTIKKDLNDLIDAGLSLSAASKYLAKKNSLKKSEVYNLI
>Mature_286_residues
MNNNSSLSHRKEEPENGILYIVGTPIGNLNDISQRALNILQNVSFIACEDTRQTKKIMNKFNISNKLISFNKHNSLIKIP
KIVKDLKDGKSIAIVSDAGMPGICDPGEEIARSVKYEGIDMICVPGACAAITALVSSGLPSSRFVFEGFLPKKKIDREKI
LLEISKNEKTTIIYESPKRLSKLLDELLKFCGGDREIMVARELTKKFEEHVGHDINNVIEFFRDKDIIGEITIVIKGIRK
TDFNPNKSTIKKDLNDLIDAGLSLSAASKYLAKKNSLKKSEVYNLI

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=232, Percent_Identity=41.3793103448276, Blast_Score=194, Evalue=7e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 31911; Mature: 31911

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNNSSLSHRKEEPENGILYIVGTPIGNLNDISQRALNILQNVSFIACEDTRQTKKIMNK
CCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHH
FNISNKLISFNKHNSLIKIPKIVKDLKDGKSIAIVSDAGMPGICDPGEEIARSVKYEGID
HCCCHHEEEECCCCCEEEHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCEE
MICVPGACAAITALVSSGLPSSRFVFEGFLPKKKIDREKILLEISKNEKTTIIYESPKRL
EEECCCHHHHHHHHHHCCCCCCCHHEECCCCHHHCCHHHEEEEECCCCCEEEEEECHHHH
SKLLDELLKFCGGDREIMVARELTKKFEEHVGHDINNVIEFFRDKDIIGEITIVIKGIRK
HHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHEEEHEEEHHHH
TDFNPNKSTIKKDLNDLIDAGLSLSAASKYLAKKNSLKKSEVYNLI
CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHCCC
>Mature Secondary Structure
MNNNSSLSHRKEEPENGILYIVGTPIGNLNDISQRALNILQNVSFIACEDTRQTKKIMNK
CCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHH
FNISNKLISFNKHNSLIKIPKIVKDLKDGKSIAIVSDAGMPGICDPGEEIARSVKYEGID
HCCCHHEEEECCCCCEEEHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCEE
MICVPGACAAITALVSSGLPSSRFVFEGFLPKKKIDREKILLEISKNEKTTIIYESPKRL
EEECCCHHHHHHHHHHCCCCCCCHHEECCCCHHHCCHHHEEEEECCCCCEEEEEECHHHH
SKLLDELLKFCGGDREIMVARELTKKFEEHVGHDINNVIEFFRDKDIIGEITIVIKGIRK
HHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHEEEHEEEHHHH
TDFNPNKSTIKKDLNDLIDAGLSLSAASKYLAKKNSLKKSEVYNLI
CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]