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The map label for this gene is yidC [H]

Identifier: 123968912

GI number: 123968912

Start: 1145320

End: 1146462

Strand: Direct

Name: yidC [H]

Synonym: A9601_13791

Alternate gene names: 123968912

Gene position: 1145320-1146462 (Clockwise)

Preceding gene: 123968911

Following gene: 123968913

Centisome position: 68.59

GC content: 36.57

Gene sequence:

>1143_bases
GTGATAGGGTTCATTTCTGAAAAACTACTTATCCCGATTCTAGATTTTTTCTATGGCCTAGTACCCAGCTACGGATTGGC
GATTGTTGCACTAACAGTAGTAATAAGGATTGCTCTTTTCCCTTTAAGTGCTGGGTCAATTAGAAGTGCAAGAAGAATGA
AAATTGCACAACCAGTAATGCAAAAAAAGCAAGCAGAAATAAAATCTAAGTTTTCAGGTGATCCAAAGAAACAGCAAGAA
GAATTAGGAAAATTAATGAATGAGTTTGGCAGTCCTCTTGCAGGTTGCCTTCCTTTGATTGTCCAAATGCCCGTGCTATT
TGCATTGTTTGCAACCCTTAGAGGATCTCCATTTGCTGATGTTCCTTACAACATAAATCTTAAGGTCGTCCCTCAAGATC
AAATTGCTGCTATTGACCCAAAACCCTATAAATCACCAAGACATTCTATTTTTATTACAGAAAAATCACATTTTCCTGTA
GTAGCAACTATTCCAAATGGAACAAAATTAGGTACAGAAGATTCAATAAAAATAAATTTGCAAACAACAAATGGAAATAG
CTACTCAGAAGTTTTATCCAATTACGAAAATGGATCCAAATTCCTCCCTACTTGGACGGTTTCAAAAGGTTCTGAAAATT
TAAAAGTTTCCCAAGACGGTACAGTCACTGCAATTAAACCAGGCGATGCAACAATTGAAGCAAAAATTCCAGGTCTAGCT
GCTAAGAGCGGTTTTCTATTTATTAAAGCCCTCGGTCAAGTGGGTTTTTATGTAGATGGGGCTGTTAATTGGGATATCGC
TGCATTAGTTGGTGCCTTTGGATTAACTCTACTTCTTTCCCAAGTTTTATCTAGTCAAGGGATGCCTGCGAATCCTCAAC
AATCAACAGCTAACAAGATTACACCAGTTATGATTACTGGAATGTTCCTGTTCTTCCCATTACCTGCAGGAGTATTACTT
TATATGGTTGTTGCCAATATATTTCAAGCATTTCAGACCTTTCTTCTTAATAAAGAAGCTCTTCCTGAGAATCTACAGAA
AATTCTGGATCAACAATTATTGGCAAAAGATGAAGTAATAACAACTTCTGCTTCAACTATTTCAGAGAAAAGATTGCCTT
TTGAACCTAACAGTAAAAAATAG

Upstream 100 bases:

>100_bases
GGTTGAGGGATTTGCAACTAAATCCTAAACAAATTAATTACAAAAACCTTTTTTTCCTGTAAAATAAAATGTCTAGTAAA
ATTACACTCTTTTTAATATC

Downstream 100 bases:

>100_bases
TCTTATATCTTAAGTAATGAATTCTTGGAGTAGAAATTTAGAGTTACTTATAAAATCAAGAACATCATTAATTTGGATAA
GGACTAAAGAAGAGGAAAGA

Product: putative inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MIGFISEKLLIPILDFFYGLVPSYGLAIVALTVVIRIALFPLSAGSIRSARRMKIAQPVMQKKQAEIKSKFSGDPKKQQE
ELGKLMNEFGSPLAGCLPLIVQMPVLFALFATLRGSPFADVPYNINLKVVPQDQIAAIDPKPYKSPRHSIFITEKSHFPV
VATIPNGTKLGTEDSIKINLQTTNGNSYSEVLSNYENGSKFLPTWTVSKGSENLKVSQDGTVTAIKPGDATIEAKIPGLA
AKSGFLFIKALGQVGFYVDGAVNWDIAALVGAFGLTLLLSQVLSSQGMPANPQQSTANKITPVMITGMFLFFPLPAGVLL
YMVVANIFQAFQTFLLNKEALPENLQKILDQQLLAKDEVITTSASTISEKRLPFEPNSKK

Sequences:

>Translated_380_residues
MIGFISEKLLIPILDFFYGLVPSYGLAIVALTVVIRIALFPLSAGSIRSARRMKIAQPVMQKKQAEIKSKFSGDPKKQQE
ELGKLMNEFGSPLAGCLPLIVQMPVLFALFATLRGSPFADVPYNINLKVVPQDQIAAIDPKPYKSPRHSIFITEKSHFPV
VATIPNGTKLGTEDSIKINLQTTNGNSYSEVLSNYENGSKFLPTWTVSKGSENLKVSQDGTVTAIKPGDATIEAKIPGLA
AKSGFLFIKALGQVGFYVDGAVNWDIAALVGAFGLTLLLSQVLSSQGMPANPQQSTANKITPVMITGMFLFFPLPAGVLL
YMVVANIFQAFQTFLLNKEALPENLQKILDQQLLAKDEVITTSASTISEKRLPFEPNSKK
>Mature_380_residues
MIGFISEKLLIPILDFFYGLVPSYGLAIVALTVVIRIALFPLSAGSIRSARRMKIAQPVMQKKQAEIKSKFSGDPKKQQE
ELGKLMNEFGSPLAGCLPLIVQMPVLFALFATLRGSPFADVPYNINLKVVPQDQIAAIDPKPYKSPRHSIFITEKSHFPV
VATIPNGTKLGTEDSIKINLQTTNGNSYSEVLSNYENGSKFLPTWTVSKGSENLKVSQDGTVTAIKPGDATIEAKIPGLA
AKSGFLFIKALGQVGFYVDGAVNWDIAALVGAFGLTLLLSQVLSSQGMPANPQQSTANKITPVMITGMFLFFPLPAGVLL
YMVVANIFQAFQTFLLNKEALPENLQKILDQQLLAKDEVITTSASTISEKRLPFEPNSKK

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790140, Length=126, Percent_Identity=31.7460317460317, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001708 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 41266; Mature: 41266

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGFISEKLLIPILDFFYGLVPSYGLAIVALTVVIRIALFPLSAGSIRSARRMKIAQPVM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
QKKQAEIKSKFSGDPKKQQEELGKLMNEFGSPLAGCLPLIVQMPVLFALFATLRGSPFAD
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
VPYNINLKVVPQDQIAAIDPKPYKSPRHSIFITEKSHFPVVATIPNGTKLGTEDSIKINL
CCEEEEEEEECCCCEEECCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCEEEEEE
QTTNGNSYSEVLSNYENGSKFLPTWTVSKGSENLKVSQDGTVTAIKPGDATIEAKIPGLA
EECCCCCHHHHHHCCCCCCEECCEEEECCCCCCEEECCCCCEEEECCCCCEEEEECCCCC
AKSGFLFIKALGQVGFYVDGAVNWDIAALVGAFGLTLLLSQVLSSQGMPANPQQSTANKI
CCCCHHHEEEHHHCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCC
TPVMITGMFLFFPLPAGVLLYMVVANIFQAFQTFLLNKEALPENLQKILDQQLLAKDEVI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCHHHHHHHHHHHHHHHHHHE
TTSASTISEKRLPFEPNSKK
ECCHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MIGFISEKLLIPILDFFYGLVPSYGLAIVALTVVIRIALFPLSAGSIRSARRMKIAQPVM
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
QKKQAEIKSKFSGDPKKQQEELGKLMNEFGSPLAGCLPLIVQMPVLFALFATLRGSPFAD
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
VPYNINLKVVPQDQIAAIDPKPYKSPRHSIFITEKSHFPVVATIPNGTKLGTEDSIKINL
CCEEEEEEEECCCCEEECCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCEEEEEE
QTTNGNSYSEVLSNYENGSKFLPTWTVSKGSENLKVSQDGTVTAIKPGDATIEAKIPGLA
EECCCCCHHHHHHCCCCCCEECCEEEECCCCCCEEECCCCCEEEECCCCCEEEEECCCCC
AKSGFLFIKALGQVGFYVDGAVNWDIAALVGAFGLTLLLSQVLSSQGMPANPQQSTANKI
CCCCHHHEEEHHHCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCC
TPVMITGMFLFFPLPAGVLLYMVVANIFQAFQTFLLNKEALPENLQKILDQQLLAKDEVI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCHHHHHHHHHHHHHHHHHHE
TTSASTISEKRLPFEPNSKK
ECCHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12917642 [H]