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The map label for this gene is rnpA [H]

Identifier: 123968910

GI number: 123968910

Start: 1144451

End: 1144837

Strand: Direct

Name: rnpA [H]

Synonym: A9601_13771

Alternate gene names: 123968910

Gene position: 1144451-1144837 (Clockwise)

Preceding gene: 123968909

Following gene: 123968911

Centisome position: 68.53

GC content: 29.2

Gene sequence:

>387_bases
ATGGCCATACCTAAGGATATGCGTTTAAAAGGTCACAGGACTTTTAATTATATTCACAAAAATTCAATGACATATCATGG
GAAATTAATGACATTTAAAGTTGCAAGATCAAATCCAGAAATACTCTTAACCCATAAACTCACAAATACCTCAAACAATT
TTAGGGTTGCAATTGCTATTAGCAAAAAAGTTTCAAAAAAAGCTGTAGAAAGAAATAAATTAAGAAGAATTCTGCAAGAG
TGGTTATTAACAAATATTCAAAAAATTAATAACCACAAACCTTATTGGTTACTTGTTAACCTTAAATTTGGGGATTTCCG
CAATGACAAAAGTAAGCTTTTGGAGGAATTTCAAAACTTAATGTTTAAATCTCGTCTAATCAAATGA

Upstream 100 bases:

>100_bases
TGGTTTTAGAGTAAGAATGCGTTCTCATACAGGTAGAAGAGTTATTAAAAGCAGAAGACAAAAAGGTAGAGAAAGAATAG
CTGTATAACTTCAAATATTA

Downstream 100 bases:

>100_bases
TTAACATGAATGAAGAAACCTTTTATGAAGGTGGGCCCGCAAAAAGCGATTTAATAATAAATCTTCTTGCAGGTATAACT
ATTCTTGGGTTGCCATTTAC

Product: ribonuclease P protein component

Products: NA

Alternate protein names: RNase P protein; RNaseP protein; Protein C5 [H]

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MAIPKDMRLKGHRTFNYIHKNSMTYHGKLMTFKVARSNPEILLTHKLTNTSNNFRVAIAISKKVSKKAVERNKLRRILQE
WLLTNIQKINNHKPYWLLVNLKFGDFRNDKSKLLEEFQNLMFKSRLIK

Sequences:

>Translated_128_residues
MAIPKDMRLKGHRTFNYIHKNSMTYHGKLMTFKVARSNPEILLTHKLTNTSNNFRVAIAISKKVSKKAVERNKLRRILQE
WLLTNIQKINNHKPYWLLVNLKFGDFRNDKSKLLEEFQNLMFKSRLIK
>Mature_127_residues
AIPKDMRLKGHRTFNYIHKNSMTYHGKLMTFKVARSNPEILLTHKLTNTSNNFRVAIAISKKVSKKAVERNKLRRILQEW
LLTNIQKINNHKPYWLLVNLKFGDFRNDKSKLLEEFQNLMFKSRLIK

Specific function: RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-lead

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rnpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020568
- InterPro:   IPR014721
- InterPro:   IPR000100 [H]

Pfam domain/function: PF00825 Ribonuclease_P [H]

EC number: =3.1.26.5 [H]

Molecular weight: Translated: 15283; Mature: 15152

Theoretical pI: Translated: 11.41; Mature: 11.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIPKDMRLKGHRTFNYIHKNSMTYHGKLMTFKVARSNPEILLTHKLTNTSNNFRVAIAI
CCCCCCCCCCCCCEEEEEECCCEEECCEEEEEEEECCCCCEEEEEEECCCCCCEEEEEEE
SKKVSKKAVERNKLRRILQEWLLTNIQKINNHKPYWLLVNLKFGDFRNDKSKLLEEFQNL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHHHH
MFKSRLIK
HHHHHCCC
>Mature Secondary Structure 
AIPKDMRLKGHRTFNYIHKNSMTYHGKLMTFKVARSNPEILLTHKLTNTSNNFRVAIAI
CCCCCCCCCCCCEEEEEECCCEEECCEEEEEEEECCCCCEEEEEEECCCCCCEEEEEEE
SKKVSKKAVERNKLRRILQEWLLTNIQKINNHKPYWLLVNLKFGDFRNDKSKLLEEFQNL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHHHH
MFKSRLIK
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA