Click here to switch to the map view.

The map label for this gene is 123968901

Identifier: 123968901

GI number: 123968901

Start: 1137380

End: 1138165

Strand: Direct

Name: 123968901

Synonym: A9601_13681

Alternate gene names: NA

Gene position: 1137380-1138165 (Clockwise)

Preceding gene: 123968900

Following gene: 123968902

Centisome position: 68.11

GC content: 28.12

Gene sequence:

>786_bases
ATGGGTCTATTATTAAAGGAAGGCATAGATATAAACCTAATTAAAAGTGCATTTTTAGCATTCTTTGTAATTGGATTTTT
AATAACTTTAATAAATATAATCCCAATATTTAAGAAAAGGCTTCCAAATTACACATTGCAGCTAGCAGGTCTAATAGGTA
ATACATCATTTCTTGGAATACCAATTGCGCTTGCTCTTCTACCTTCAACAACTATAAATTTTACTATTGGATTTGATTTA
GGAACAACACTTTTCGCTTGGATATTTGGACCTTTTTTTCTTCAAGAAAAATCCAACAGCAATAATATCCCAAACATCAA
TGGACTATTAAATGCTTTGATAAATAGCCCTGCATCAAGAGGGATTATTGGTGTACTTCTTGCATATCTTTTCCAAATAG
ATGAAATTATAGGCAATTATCTTTGGATTCCTGCAAGGTTAGTTATTGCATTGGCAATAATAATTGTGGGAACAAGACTT
GGAATAATAACAAATCAAAAGGGAAGGATTTTAGATCTAAATAAAGAAATTAAATTTTCAATTTTATTAAAATTATTTAT
TCTTCCTTTATTAATTTTTTTAATATGTAAATCTTTAAACTTTAATTTCTATGAATCATCAGCAATAATTCTACAGGCAG
CCACCCCAACAGCAATATCCACAATATTAATGGCAGAGGCTTACGGTGTAAAACAACAAATCGCTTCAAAAATTCTTTTT
ACTACAACTCTAATTTCAATAATTACAATTCCTTTATTAAAAATATGTATGAACTTATATATTTAA

Upstream 100 bases:

>100_bases
TCCTTTCTTAATCCTTGGTTTTCTTCTCGGGAAAAAGAATCCAAAGATTTCAAAGTATATTGCAAGACCTCTAATAAGAT
TTGGCATTCCATTAAGTGTA

Downstream 100 bases:

>100_bases
GCAACTTAATGGGAGAAAACCCGTTTTTGGCAGCATGATTAATGAAAATTGTAAAGTTTATATCCTGATAACTACATAAT
GTCTTAAGATTTAGGTTATG

Product: AEC family transporter

Products: NA

Alternate protein names: Permease; Transporter Auxin Efflux Carrier; ABC Transporter; Transporter Auxin Efflux Carrier Family Protein

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MGLLLKEGIDINLIKSAFLAFFVIGFLITLINIIPIFKKRLPNYTLQLAGLIGNTSFLGIPIALALLPSTTINFTIGFDL
GTTLFAWIFGPFFLQEKSNSNNIPNINGLLNALINSPASRGIIGVLLAYLFQIDEIIGNYLWIPARLVIALAIIIVGTRL
GIITNQKGRILDLNKEIKFSILLKLFILPLLIFLICKSLNFNFYESSAIILQAATPTAISTILMAEAYGVKQQIASKILF
TTTLISIITIPLLKICMNLYI

Sequences:

>Translated_261_residues
MGLLLKEGIDINLIKSAFLAFFVIGFLITLINIIPIFKKRLPNYTLQLAGLIGNTSFLGIPIALALLPSTTINFTIGFDL
GTTLFAWIFGPFFLQEKSNSNNIPNINGLLNALINSPASRGIIGVLLAYLFQIDEIIGNYLWIPARLVIALAIIIVGTRL
GIITNQKGRILDLNKEIKFSILLKLFILPLLIFLICKSLNFNFYESSAIILQAATPTAISTILMAEAYGVKQQIASKILF
TTTLISIITIPLLKICMNLYI
>Mature_260_residues
GLLLKEGIDINLIKSAFLAFFVIGFLITLINIIPIFKKRLPNYTLQLAGLIGNTSFLGIPIALALLPSTTINFTIGFDLG
TTLFAWIFGPFFLQEKSNSNNIPNINGLLNALINSPASRGIIGVLLAYLFQIDEIIGNYLWIPARLVIALAIIIVGTRLG
IITNQKGRILDLNKEIKFSILLKLFILPLLIFLICKSLNFNFYESSAIILQAATPTAISTILMAEAYGVKQQIASKILFT
TTLISIITIPLLKICMNLYI

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28745; Mature: 28614

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLLLKEGIDINLIKSAFLAFFVIGFLITLINIIPIFKKRLPNYTLQLAGLIGNTSFLGI
CCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHCCCCHHHH
PIALALLPSTTINFTIGFDLGTTLFAWIFGPFFLQEKSNSNNIPNINGLLNALINSPASR
HHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCC
GIIGVLLAYLFQIDEIIGNYLWIPARLVIALAIIIVGTRLGIITNQKGRILDLNKEIKFS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCEEECCCHHHHH
ILLKLFILPLLIFLICKSLNFNFYESSAIILQAATPTAISTILMAEAYGVKQQIASKILF
HHHHHHHHHHHHHHHHHHCCCCEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
TTTLISIITIPLLKICMNLYI
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GLLLKEGIDINLIKSAFLAFFVIGFLITLINIIPIFKKRLPNYTLQLAGLIGNTSFLGI
CCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHCCCCHHHH
PIALALLPSTTINFTIGFDLGTTLFAWIFGPFFLQEKSNSNNIPNINGLLNALINSPASR
HHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCC
GIIGVLLAYLFQIDEIIGNYLWIPARLVIALAIIIVGTRLGIITNQKGRILDLNKEIKFS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCEEECCCHHHHH
ILLKLFILPLLIFLICKSLNFNFYESSAIILQAATPTAISTILMAEAYGVKQQIASKILF
HHHHHHHHHHHHHHHHHHCCCCEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
TTTLISIITIPLLKICMNLYI
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA