| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968887
Identifier: 123968887
GI number: 123968887
Start: 1128416
End: 1128655
Strand: Direct
Name: 123968887
Synonym: A9601_13541
Alternate gene names: NA
Gene position: 1128416-1128655 (Clockwise)
Preceding gene: 123968886
Following gene: 123968893
Centisome position: 67.57
GC content: 39.17
Gene sequence:
>240_bases ATGCCAAGAAAAAGTCCAATTTCAATATTCTTAGCTGCTACAAGTATTCTTACGATAGCTGCAACTGAAGATATTGCATC AAAAGCGGGAGAGAATGATATCGGAGGATTAAAAGAATGGAGCACTGATATGCCGATTGATGCAGATTTCGTACTCGATG AAAATGCTCAAAAACTAGCCGATGAAGCTGCAAAATCAAGTGCTTGTGTTCCTATTGGGGAAGGAGAGAATTGTTGGTAA
Upstream 100 bases:
>100_bases CAAATCTTCTGAGATTACTTGGTAATTAGAGAATCATTTTATACACTCAATAGATAATAATTCTTGAATTCTTTATTATA TATAAAGTTATTAAAATAAA
Downstream 100 bases:
>100_bases AAAACTAAAAGTTTTTAAAATATAAAAAAGCAAAAAAAAACACCCTTTCGGGTGTTTTTTAATTTGTTCACTATATTTAG AATTTAAATGTAGTTTGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 79; Mature: 78
Protein sequence:
>79_residues MPRKSPISIFLAATSILTIAATEDIASKAGENDIGGLKEWSTDMPIDADFVLDENAQKLADEAAKSSACVPIGEGENCW
Sequences:
>Translated_79_residues MPRKSPISIFLAATSILTIAATEDIASKAGENDIGGLKEWSTDMPIDADFVLDENAQKLADEAAKSSACVPIGEGENCW >Mature_78_residues PRKSPISIFLAATSILTIAATEDIASKAGENDIGGLKEWSTDMPIDADFVLDENAQKLADEAAKSSACVPIGEGENCW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8340; Mature: 8209
Theoretical pI: Translated: 3.91; Mature: 3.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRKSPISIFLAATSILTIAATEDIASKAGENDIGGLKEWSTDMPIDADFVLDENAQKLA CCCCCCCEEEEEHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHH DEAAKSSACVPIGEGENCW HHHHCCCCCEECCCCCCCC >Mature Secondary Structure PRKSPISIFLAATSILTIAATEDIASKAGENDIGGLKEWSTDMPIDADFVLDENAQKLA CCCCCCEEEEEHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHH DEAAKSSACVPIGEGENCW HHHHCCCCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA