| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
Click here to switch to the map view.
The map label for this gene is 123968878
Identifier: 123968878
GI number: 123968878
Start: 1120077
End: 1121381
Strand: Direct
Name: 123968878
Synonym: A9601_13451
Alternate gene names: NA
Gene position: 1120077-1121381 (Clockwise)
Preceding gene: 123968877
Following gene: 123968879
Centisome position: 67.08
GC content: 27.51
Gene sequence:
>1305_bases ATGAAAGATATTTACAATGATTTATCTTTTTTATTCAATAATAATAGAGGTATAGTTAGTGACTTAAATAATGATTTAAA CAAAAGATTATGTGAATTAATTCCATTTAAAAAAATAAAATATAAATCTGGAGAAAAAATTGACAATTGGAAAGTTCCTT TATCTTGGGAATTAATTAGAGTAGAAGTTAAAATTAATTCCTTATCAATAAATCAAAAAGATATACCTTTGATTGTGCCT TTTGGAACCGCATCATTTAGAGTTTCAGGAAATTATATTGATCTTAAAAAATTTATTTATACTTTAGAGGATAAACCTTT AGCTACTCCTTATAGAACAAATTACTATTCGCCCAAAAATTATAAGATCTGTTTACCCTTTAAATATTTATCCTGTCTAA ATGATGAAGACCAAATATCAATAAATGTAGAGTCAAGAACCAAGCCATCGAATTTAGAAGTTCTTGAAATAACCTTAGAA GGTAATTCAAAGCATGAAATTCTTTTTACAACTTATAACTGTCATCCTGGATTAGGTAATGATAATTTTTCCGGTTTAAT TGGATTGTGCAAATTATACAGACAACTTTCAAATCTTAATAACCTTCACTTTACTTATCGTTTTGCCGTTTTCCCAGAGA CAATAGGTGCTATTTTTTATATAAACTATCTTCAAAAAAATGATGAATTACAAAATATTCTTTTTAGCTCAGTTTTAACA TGCCTAGGAGGTAAATTAAAAAATTATAGTTTCAAAGAATCCCCAGTAAAATCATCTTATTCCGAAGCGTATAAAAACGA ATTAAAAAAAGAAATCCCTAATATAAAAATAATGCCATTTACTCCTGATGGCAGTGATGAGAGACAATTCTCTTCCCCAA ATGTTGGAATTGCGAGTTCAAGCCTATGCAGAAACAGATACTACGAATATGAAGAATATCATACATCTCTTGATACACTT GAATATATGGATATTTGTGCAGTAAACGAAAGCACAAATTTTATATTTAATGCAATTAAAAGTCTTGATAAAAATCTCAG GATTCCAAAGTCTCATGCCAGATTTGGAGAACCTTGCTTAAGTGCTTATGATTTGTTTTTACATGATGGGGGCTCATATA CATCGAAAAAAACCAATTCTAATATAAATCAAAAAAAAATATTATTTACACTTTTATCAATTATTGATGGTAAACTCTCT TTCGAAGAGATAGTTAAACTTACTATGAGTAAAATAGATTCCGAGAGATCAGATGTTGAGAAAGTTCTTCAAAAAGTAAT AGATTTAAATATAGTTTATGATTAA
Upstream 100 bases:
>100_bases AATGGAATATAACTGAAGAGGAGCAATGGTCTAATTTATTTGAAAAAGAGATGAACTTATTTAGAGAATATTGCTCTAAA GAAAAAATAGAATTGAACAA
Downstream 100 bases:
>100_bases CTAATAATGGCAAAATCTTACAACGATGAATACTTTTTAAAGAGGTCTAAAAACAGAAATAAACTCGCTTACGAAAATGA TTTCAAATTTATAAAAAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 434; Mature: 434
Protein sequence:
>434_residues MKDIYNDLSFLFNNNRGIVSDLNNDLNKRLCELIPFKKIKYKSGEKIDNWKVPLSWELIRVEVKINSLSINQKDIPLIVP FGTASFRVSGNYIDLKKFIYTLEDKPLATPYRTNYYSPKNYKICLPFKYLSCLNDEDQISINVESRTKPSNLEVLEITLE GNSKHEILFTTYNCHPGLGNDNFSGLIGLCKLYRQLSNLNNLHFTYRFAVFPETIGAIFYINYLQKNDELQNILFSSVLT CLGGKLKNYSFKESPVKSSYSEAYKNELKKEIPNIKIMPFTPDGSDERQFSSPNVGIASSSLCRNRYYEYEEYHTSLDTL EYMDICAVNESTNFIFNAIKSLDKNLRIPKSHARFGEPCLSAYDLFLHDGGSYTSKKTNSNINQKKILFTLLSIIDGKLS FEEIVKLTMSKIDSERSDVEKVLQKVIDLNIVYD
Sequences:
>Translated_434_residues MKDIYNDLSFLFNNNRGIVSDLNNDLNKRLCELIPFKKIKYKSGEKIDNWKVPLSWELIRVEVKINSLSINQKDIPLIVP FGTASFRVSGNYIDLKKFIYTLEDKPLATPYRTNYYSPKNYKICLPFKYLSCLNDEDQISINVESRTKPSNLEVLEITLE GNSKHEILFTTYNCHPGLGNDNFSGLIGLCKLYRQLSNLNNLHFTYRFAVFPETIGAIFYINYLQKNDELQNILFSSVLT CLGGKLKNYSFKESPVKSSYSEAYKNELKKEIPNIKIMPFTPDGSDERQFSSPNVGIASSSLCRNRYYEYEEYHTSLDTL EYMDICAVNESTNFIFNAIKSLDKNLRIPKSHARFGEPCLSAYDLFLHDGGSYTSKKTNSNINQKKILFTLLSIIDGKLS FEEIVKLTMSKIDSERSDVEKVLQKVIDLNIVYD >Mature_434_residues MKDIYNDLSFLFNNNRGIVSDLNNDLNKRLCELIPFKKIKYKSGEKIDNWKVPLSWELIRVEVKINSLSINQKDIPLIVP FGTASFRVSGNYIDLKKFIYTLEDKPLATPYRTNYYSPKNYKICLPFKYLSCLNDEDQISINVESRTKPSNLEVLEITLE GNSKHEILFTTYNCHPGLGNDNFSGLIGLCKLYRQLSNLNNLHFTYRFAVFPETIGAIFYINYLQKNDELQNILFSSVLT CLGGKLKNYSFKESPVKSSYSEAYKNELKKEIPNIKIMPFTPDGSDERQFSSPNVGIASSSLCRNRYYEYEEYHTSLDTL EYMDICAVNESTNFIFNAIKSLDKNLRIPKSHARFGEPCLSAYDLFLHDGGSYTSKKTNSNINQKKILFTLLSIIDGKLS FEEIVKLTMSKIDSERSDVEKVLQKVIDLNIVYD
Specific function: Unknown
COG id: COG4310
COG function: function code R; Uncharacterized protein conserved in bacteria with an aminopeptidase-like domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49991; Mature: 49991
Theoretical pI: Translated: 7.91; Mature: 7.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDIYNDLSFLFNNNRGIVSDLNNDLNKRLCELIPFKKIKYKSGEKIDNWKVPLSWELIR CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHEECCCCCCCCCCCCCEEEEEEE VEVKINSLSINQKDIPLIVPFGTASFRVSGNYIDLKKFIYTLEDKPLATPYRTNYYSPKN EEEEEEEEECCCCCCCEEEECCCEEEEEECCEEEHHHHHHHHCCCCCCCCCCCCCCCCCC YKICLPFKYLSCLNDEDQISINVESRTKPSNLEVLEITLEGNSKHEILFTTYNCHPGLGN CEEEECHHHHHHCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCEEEEEEEECCCCCCC DNFSGLIGLCKLYRQLSNLNNLHFTYRFAVFPETIGAIFYINYLQKNDELQNILFSSVLT CCHHHHHHHHHHHHHHHCCCCEEEEEEEEECHHHHHHEEEEHHHHCCHHHHHHHHHHHHH CLGGKLKNYSFKESPVKSSYSEAYKNELKKEIPNIKIMPFTPDGSDERQFSSPNVGIASS HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCHH SLCRNRYYEYEEYHTSLDTLEYMDICAVNESTNFIFNAIKSLDKNLRIPKSHARFGEPCL HHHHHHCCCHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHCCCCCHHHHHCCCHHH SAYDLFLHDGGSYTSKKTNSNINQKKILFTLLSIIDGKLSFEEIVKLTMSKIDSERSDVE HHHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHH KVLQKVIDLNIVYD HHHHHHHCCEEECC >Mature Secondary Structure MKDIYNDLSFLFNNNRGIVSDLNNDLNKRLCELIPFKKIKYKSGEKIDNWKVPLSWELIR CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHEECCCCCCCCCCCCCEEEEEEE VEVKINSLSINQKDIPLIVPFGTASFRVSGNYIDLKKFIYTLEDKPLATPYRTNYYSPKN EEEEEEEEECCCCCCCEEEECCCEEEEEECCEEEHHHHHHHHCCCCCCCCCCCCCCCCCC YKICLPFKYLSCLNDEDQISINVESRTKPSNLEVLEITLEGNSKHEILFTTYNCHPGLGN CEEEECHHHHHHCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCEEEEEEEECCCCCCC DNFSGLIGLCKLYRQLSNLNNLHFTYRFAVFPETIGAIFYINYLQKNDELQNILFSSVLT CCHHHHHHHHHHHHHHHCCCCEEEEEEEEECHHHHHHEEEEHHHHCCHHHHHHHHHHHHH CLGGKLKNYSFKESPVKSSYSEAYKNELKKEIPNIKIMPFTPDGSDERQFSSPNVGIASS HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCHH SLCRNRYYEYEEYHTSLDTLEYMDICAVNESTNFIFNAIKSLDKNLRIPKSHARFGEPCL HHHHHHCCCHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHCCCCCHHHHHCCCHHH SAYDLFLHDGGSYTSKKTNSNINQKKILFTLLSIIDGKLSFEEIVKLTMSKIDSERSDVE HHHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHH KVLQKVIDLNIVYD HHHHHHHCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA