| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968872
Identifier: 123968872
GI number: 123968872
Start: 1113600
End: 1115423
Strand: Reverse
Name: 123968872
Synonym: A9601_13391
Alternate gene names: NA
Gene position: 1115423-1113600 (Counterclockwise)
Preceding gene: 123968880
Following gene: 123968869
Centisome position: 66.8
GC content: 29.11
Gene sequence:
>1824_bases ATGAGGTTGATTTTTTATATATTTTTAATTAGTCAATTCTTAAATTTTCTTGGAGTATTTGCAGAAAAAGTTAAAGAAGA CTCGTCTGGATTAAATTCGGTTAACTGGACAAAGGTGGATGAAAATAAACGTAAACCATTGAAAAAGATTATCTGGAAAT CTTACAAGAATGATGAATTTTATTTTGGGGATCAAAAACGACAAGGTTCAATTATAAATAAGACTAAATTATCAAACGAA GAAAGAAAATATGAATCCTCAAAAAAATCAGTTTCTTCTATTATTGAAATCGAACCTTTTTTGCCACTTAATAATTTTCT TGATAATGGCAACTATCAAACCTCTATTAGGTGGAAATCATCTTTTGAAGGAGGTGTATCGGGAGGAACTGGGCAACAAA ACCCTGCATTTATTTTTGATTATGGTATTTCAGATTCTTCACTCATGACTGTATATTTTGCTGAGGCTGATGATGATTTA TACAATCTTATTGATGGTCAAAAAGTAAATTACAATTGGCAAAACTATGCTATTTCATTTAAGAAAGAATTATTAAATGG CGATGTAAATAGCTTAAGAGTTTCCATAGTACCAACCATTGAGTATTGGAGGCAAGCTAGCGGAACTAAAGACTCTAAAA GTATTTTTAATCAAAAAGACAGTTTAAATGGAAGAGATAGATTTGATAATTTGATTGGGTCATTGTCCTTGCCAATATCA AAAAAATTAAATGAAAATTTAACTGCTTTAATTGTTCCTGGCATTAATTTCTTGCCTGAAAAGTTAGGTTCAAAAGGGAT TGGTAAAAACGCGTATGGTAATAATTTCTATATTGGAAGTGGTCTTGTCTTTGATGTTGCTAAAGATCTTAATCTTCTTT TCTCATATACAACCCCTTTAGGGCCAGGAAATAATTATTTTGACAGCGATTTGAAATACTCTAGAAAGCCTATTTATAGT ATTGGTTTAGGATGGGATATTAATCCCAAAATTGGAATTGAAGGAAAAATAACAAACTCCTTTGGTGCAACTCCATCTAC TGGACTATTAACTATCCCATCAGATGATCTGGCACTTTATTCTGCCAAAATTACTTATAAACCTTATGAAAAAAATACCT ACCTTACTCCGTTAATAAAAAGAGATAAATCTATTAGAAATGGTGGAATTACAGTAAATAATGCCTTGTTACCAAAAGCG GGAACTTCACAAATTAAATTTAACTATGATAGCAAAGGTAATTTGTTTGGTTTTTATGGTTATTCTTTATCAAATATTTT TCAATTAGAGCTTTTAAGTATTGGTAGTTTTAATGATTTGAACTTTAGTAAAAGTAAAAATTCAAATCTATATTCAACCT ACTTAGGTGAAAATAATCTTAATTATCGATTAGGTGGCAAGCTTTTAATATTTAGTCCCCAAAAAAATGACCTTTATTGG CTCACATTTAGATCATCTGTTGGAAGAAATGACGATAGTAATCAAGGGTATTTATTTACAGAATTTATAAATACTTTTAG ATTAAATAATTGGTTGGCATTTAATATAAGTCCTAAATACTTTTTTAGTGGAGTGGAAAGTTTTGGGGGGATAGGCTTTT CAAGTTATATAAATTTATCAGATAATTTGATGCTTATCCCAGAAATAAATACTTCAATTAAAAACGATTCTGATTTTAAT TCAACTCTCGCATTGAGATATTCTCTTTCTCCTGAAAAGTCATTAGATTTATATTATTCCAATGCTGTAGGAGTTCAAGA TATAGGACAAATTCTTAAAAATGAAGAATATACGTTTGGAATTAATTTGAATTTTTTATATTAA
Upstream 100 bases:
>100_bases TTACCTGGTAAGTCAATTTCTTTAGAAGCTTGAGATTGATCGATGTTGTTAACATTGCTTATAATTAAGAAAATACGTAT CAAATCTAAGAAGTTTTTAA
Downstream 100 bases:
>100_bases AAAAGAATATAAGATTTAGCTTTCCCAAAAGGGATCTGTAGTTAAAGAAACTTTTAATAGACTTTTTTTATTGCTTTTAA TATCGCTTATACAAGCCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 607; Mature: 607
Protein sequence:
>607_residues MRLIFYIFLISQFLNFLGVFAEKVKEDSSGLNSVNWTKVDENKRKPLKKIIWKSYKNDEFYFGDQKRQGSIINKTKLSNE ERKYESSKKSVSSIIEIEPFLPLNNFLDNGNYQTSIRWKSSFEGGVSGGTGQQNPAFIFDYGISDSSLMTVYFAEADDDL YNLIDGQKVNYNWQNYAISFKKELLNGDVNSLRVSIVPTIEYWRQASGTKDSKSIFNQKDSLNGRDRFDNLIGSLSLPIS KKLNENLTALIVPGINFLPEKLGSKGIGKNAYGNNFYIGSGLVFDVAKDLNLLFSYTTPLGPGNNYFDSDLKYSRKPIYS IGLGWDINPKIGIEGKITNSFGATPSTGLLTIPSDDLALYSAKITYKPYEKNTYLTPLIKRDKSIRNGGITVNNALLPKA GTSQIKFNYDSKGNLFGFYGYSLSNIFQLELLSIGSFNDLNFSKSKNSNLYSTYLGENNLNYRLGGKLLIFSPQKNDLYW LTFRSSVGRNDDSNQGYLFTEFINTFRLNNWLAFNISPKYFFSGVESFGGIGFSSYINLSDNLMLIPEINTSIKNDSDFN STLALRYSLSPEKSLDLYYSNAVGVQDIGQILKNEEYTFGINLNFLY
Sequences:
>Translated_607_residues MRLIFYIFLISQFLNFLGVFAEKVKEDSSGLNSVNWTKVDENKRKPLKKIIWKSYKNDEFYFGDQKRQGSIINKTKLSNE ERKYESSKKSVSSIIEIEPFLPLNNFLDNGNYQTSIRWKSSFEGGVSGGTGQQNPAFIFDYGISDSSLMTVYFAEADDDL YNLIDGQKVNYNWQNYAISFKKELLNGDVNSLRVSIVPTIEYWRQASGTKDSKSIFNQKDSLNGRDRFDNLIGSLSLPIS KKLNENLTALIVPGINFLPEKLGSKGIGKNAYGNNFYIGSGLVFDVAKDLNLLFSYTTPLGPGNNYFDSDLKYSRKPIYS IGLGWDINPKIGIEGKITNSFGATPSTGLLTIPSDDLALYSAKITYKPYEKNTYLTPLIKRDKSIRNGGITVNNALLPKA GTSQIKFNYDSKGNLFGFYGYSLSNIFQLELLSIGSFNDLNFSKSKNSNLYSTYLGENNLNYRLGGKLLIFSPQKNDLYW LTFRSSVGRNDDSNQGYLFTEFINTFRLNNWLAFNISPKYFFSGVESFGGIGFSSYINLSDNLMLIPEINTSIKNDSDFN STLALRYSLSPEKSLDLYYSNAVGVQDIGQILKNEEYTFGINLNFLY >Mature_607_residues MRLIFYIFLISQFLNFLGVFAEKVKEDSSGLNSVNWTKVDENKRKPLKKIIWKSYKNDEFYFGDQKRQGSIINKTKLSNE ERKYESSKKSVSSIIEIEPFLPLNNFLDNGNYQTSIRWKSSFEGGVSGGTGQQNPAFIFDYGISDSSLMTVYFAEADDDL YNLIDGQKVNYNWQNYAISFKKELLNGDVNSLRVSIVPTIEYWRQASGTKDSKSIFNQKDSLNGRDRFDNLIGSLSLPIS KKLNENLTALIVPGINFLPEKLGSKGIGKNAYGNNFYIGSGLVFDVAKDLNLLFSYTTPLGPGNNYFDSDLKYSRKPIYS IGLGWDINPKIGIEGKITNSFGATPSTGLLTIPSDDLALYSAKITYKPYEKNTYLTPLIKRDKSIRNGGITVNNALLPKA GTSQIKFNYDSKGNLFGFYGYSLSNIFQLELLSIGSFNDLNFSKSKNSNLYSTYLGENNLNYRLGGKLLIFSPQKNDLYW LTFRSSVGRNDDSNQGYLFTEFINTFRLNNWLAFNISPKYFFSGVESFGGIGFSSYINLSDNLMLIPEINTSIKNDSDFN STLALRYSLSPEKSLDLYYSNAVGVQDIGQILKNEEYTFGINLNFLY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68570; Mature: 68570
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLIFYIFLISQFLNFLGVFAEKVKEDSSGLNSVNWTKVDENKRKPLKKIIWKSYKNDEF CEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHCCHHHHHHHHCCCCCCE YFGDQKRQGSIINKTKLSNEERKYESSKKSVSSIIEIEPFLPLNNFLDNGNYQTSIRWKS EECCCCCCCCEEEHHHCCCHHHHHHHHHHHHHHHEEECCCCCHHHHHCCCCEEEEEEECC SFEGGVSGGTGQQNPAFIFDYGISDSSLMTVYFAEADDDLYNLIDGQKVNYNWQNYAISF CCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCHHHHHCCCCEEECCHHHEEEEE KKELLNGDVNSLRVSIVPTIEYWRQASGTKDSKSIFNQKDSLNGRDRFDNLIGSLSLPIS HHHHHCCCCCEEEEEEEECHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCHH KKLNENLTALIVPGINFLPEKLGSKGIGKNAYGNNFYIGSGLVFDVAKDLNLLFSYTTPL HHCCCCCEEEEECCCHHHHHHHCCCCCCCCCCCCCEEECCCEEEEHHHCCEEEEEECCCC GPGNNYFDSDLKYSRKPIYSIGLGWDINPKIGIEGKITNSFGATPSTGLLTIPSDDLALY CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCCEEEECCCCEEEE SAKITYKPYEKNTYLTPLIKRDKSIRNGGITVNNALLPKAGTSQIKFNYDSKGNLFGFYG EEEEEECCCCCCCEECHHHHCCCCCCCCCEEEECEECCCCCCCEEEEEECCCCCEEEEEC YSLSNIFQLELLSIGSFNDLNFSKSKNSNLYSTYLGENNLNYRLGGKLLIFSPQKNDLYW CCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCEEECCEEEEECCCCCCEEE LTFRSSVGRNDDSNQGYLFTEFINTFRLNNWLAFNISPKYFFSGVESFGGIGFSSYINLS EEEECCCCCCCCCCCCEEEHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCEEEEEECC DNLMLIPEINTSIKNDSDFNSTLALRYSLSPEKSLDLYYSNAVGVQDIGQILKNEEYTFG CCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCHHHHHHHHCCCCEEEE INLNFLY EEEEEEC >Mature Secondary Structure MRLIFYIFLISQFLNFLGVFAEKVKEDSSGLNSVNWTKVDENKRKPLKKIIWKSYKNDEF CEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHCCHHHHHHHHCCCCCCE YFGDQKRQGSIINKTKLSNEERKYESSKKSVSSIIEIEPFLPLNNFLDNGNYQTSIRWKS EECCCCCCCCEEEHHHCCCHHHHHHHHHHHHHHHEEECCCCCHHHHHCCCCEEEEEEECC SFEGGVSGGTGQQNPAFIFDYGISDSSLMTVYFAEADDDLYNLIDGQKVNYNWQNYAISF CCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCHHHHHCCCCEEECCHHHEEEEE KKELLNGDVNSLRVSIVPTIEYWRQASGTKDSKSIFNQKDSLNGRDRFDNLIGSLSLPIS HHHHHCCCCCEEEEEEEECHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCHH KKLNENLTALIVPGINFLPEKLGSKGIGKNAYGNNFYIGSGLVFDVAKDLNLLFSYTTPL HHCCCCCEEEEECCCHHHHHHHCCCCCCCCCCCCCEEECCCEEEEHHHCCEEEEEECCCC GPGNNYFDSDLKYSRKPIYSIGLGWDINPKIGIEGKITNSFGATPSTGLLTIPSDDLALY CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCCEEEECCCCEEEE SAKITYKPYEKNTYLTPLIKRDKSIRNGGITVNNALLPKAGTSQIKFNYDSKGNLFGFYG EEEEEECCCCCCCEECHHHHCCCCCCCCCEEEECEECCCCCCCEEEEEECCCCCEEEEEC YSLSNIFQLELLSIGSFNDLNFSKSKNSNLYSTYLGENNLNYRLGGKLLIFSPQKNDLYW CCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCEEECCEEEEECCCCCCEEE LTFRSSVGRNDDSNQGYLFTEFINTFRLNNWLAFNISPKYFFSGVESFGGIGFSSYINLS EEEECCCCCCCCCCCCEEEHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCEEEEEECC DNLMLIPEINTSIKNDSDFNSTLALRYSLSPEKSLDLYYSNAVGVQDIGQILKNEEYTFG CCEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCHHHHHHHHCCCCEEEE INLNFLY EEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA