Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

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The map label for this gene is yfeJ [H]

Identifier: 123968835

GI number: 123968835

Start: 1085475

End: 1086212

Strand: Direct

Name: yfeJ [H]

Synonym: A9601_13021

Alternate gene names: 123968835

Gene position: 1085475-1086212 (Clockwise)

Preceding gene: 123968834

Following gene: 123968837

Centisome position: 65.0

GC content: 31.71

Gene sequence:

>738_bases
ATGAAGGAAATAAAACGCCTGTTAGTTTTGCAGCATTTAGAAATAGAGGGGCCTGGTCTTTTTGAGCAATTTGCTAAAGA
AAGAGATTTTAAAATAGAAATTATTCGTTTAGATAATAAAAATGCTCTGCCGCAAACAAAAAAAGGTGACTTAATTTTAA
TTATGGGTGGACCAATGGGTGTTAAAGATATTGGAAGCGGAAAATATCCATGGCTTAAATTAGAAAGAGATTTTATAAAA
AAAGAATTAGAAAATGAGAGACCTATAATCGGTGTTTGCTTAGGTGCTCAATTGCTTGCGAGTGCTGCTGGGGGAGATGT
AGAAATTCTTAAATATGGATCACCTCCAAAAGCATTACCAGAAATTGGATGGTCTCAAATTTTTATAGACAAATCGAATA
AAGACTTTAAAGCACTGTTTGAAGACCCTTTTCATGTACTACATTGGCATGGAGATAGGATTTTGTTACCTAATAAAGCA
GTACTCATTGCTAGTAGTGCACGTTGTAAGGAACAGTTTTTTAGGATTGGTAATTTTGCTTACGGATTACAATTCCATAT
AGAGACGACGGGAGTAATGATAAATAACTGGATTAAAGAAGATAAAGAGTTTGTCCTTAAAGGATTAGGCTTAAATGGTC
AGGAAATTTTAGAAGAAGAGAATAAAAAATATATTGATAAAACTTTTTCAAAAAGAAAGCTTCTAATAAGTAAATTATTT
GAATTATTAGATAATTAA

Upstream 100 bases:

>100_bases
TAAGTATTGCAGCAGGTACATACCAAGAAGATACTTGGTCGGCAATGAAGTGGTTTAGCGTTAATGTCTGTTCTGAATCA
GCTGAAATAATGGAAAGTGA

Downstream 100 bases:

>100_bases
AAAGGGCATAATCAATTAAAAAAGGACTTGATAAAACCCCTGAAAAAATTTAAAAAGGATTTTTATTAGAAAATACCTGG
AAGAATTTGACCAGTAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MKEIKRLLVLQHLEIEGPGLFEQFAKERDFKIEIIRLDNKNALPQTKKGDLILIMGGPMGVKDIGSGKYPWLKLERDFIK
KELENERPIIGVCLGAQLLASAAGGDVEILKYGSPPKALPEIGWSQIFIDKSNKDFKALFEDPFHVLHWHGDRILLPNKA
VLIASSARCKEQFFRIGNFAYGLQFHIETTGVMINNWIKEDKEFVLKGLGLNGQEILEEENKKYIDKTFSKRKLLISKLF
ELLDN

Sequences:

>Translated_245_residues
MKEIKRLLVLQHLEIEGPGLFEQFAKERDFKIEIIRLDNKNALPQTKKGDLILIMGGPMGVKDIGSGKYPWLKLERDFIK
KELENERPIIGVCLGAQLLASAAGGDVEILKYGSPPKALPEIGWSQIFIDKSNKDFKALFEDPFHVLHWHGDRILLPNKA
VLIASSARCKEQFFRIGNFAYGLQFHIETTGVMINNWIKEDKEFVLKGLGLNGQEILEEENKKYIDKTFSKRKLLISKLF
ELLDN
>Mature_245_residues
MKEIKRLLVLQHLEIEGPGLFEQFAKERDFKIEIIRLDNKNALPQTKKGDLILIMGGPMGVKDIGSGKYPWLKLERDFIK
KELENERPIIGVCLGAQLLASAAGGDVEILKYGSPPKALPEIGWSQIFIDKSNKDFKALFEDPFHVLHWHGDRILLPNKA
VLIASSARCKEQFFRIGNFAYGLQFHIETTGVMINNWIKEDKEFVLKGLGLNGQEILEEENKKYIDKTFSKRKLLISKLF
ELLDN

Specific function: Unknown

COG id: COG0518

COG function: function code F; GMP synthase - Glutamine amidotransferase domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017926
- InterPro:   IPR000991 [H]

Pfam domain/function: PF00117 GATase [H]

EC number: NA

Molecular weight: Translated: 27992; Mature: 27992

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: PS00442 GATASE_TYPE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEIKRLLVLQHLEIEGPGLFEQFAKERDFKIEIIRLDNKNALPQTKKGDLILIMGGPMG
CHHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCC
VKDIGSGKYPWLKLERDFIKKELENERPIIGVCLGAQLLASAAGGDVEILKYGSPPKALP
CCCCCCCCCCEEEECHHHHHHHHCCCCCEEEEEHHHHHHHHCCCCCEEEEEECCCCCHHH
EIGWSQIFIDKSNKDFKALFEDPFHVLHWHGDRILLPNKAVLIASSARCKEQFFRIGNFA
CCCCEEEEEECCCCHHHHHHCCCCEEEEECCCEEECCCCEEEEECCHHHHHHHHHHCCEE
YGLQFHIETTGVMINNWIKEDKEFVLKGLGLNGQEILEEENKKYIDKTFSKRKLLISKLF
EEEEEEEEECCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELLDN
HHHCC
>Mature Secondary Structure
MKEIKRLLVLQHLEIEGPGLFEQFAKERDFKIEIIRLDNKNALPQTKKGDLILIMGGPMG
CHHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCC
VKDIGSGKYPWLKLERDFIKKELENERPIIGVCLGAQLLASAAGGDVEILKYGSPPKALP
CCCCCCCCCCEEEECHHHHHHHHCCCCCEEEEEHHHHHHHHCCCCCEEEEEECCCCCHHH
EIGWSQIFIDKSNKDFKALFEDPFHVLHWHGDRILLPNKAVLIASSARCKEQFFRIGNFA
CCCCEEEEEECCCCHHHHHHCCCCEEEEECCCEEECCCCEEEEECCHHHHHHHHHHCCEE
YGLQFHIETTGVMINNWIKEDKEFVLKGLGLNGQEILEEENKKYIDKTFSKRKLLISKLF
EEEEEEEEECCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELLDN
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7612925; 11677609 [H]