| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is yfeJ [H]
Identifier: 123968835
GI number: 123968835
Start: 1085475
End: 1086212
Strand: Direct
Name: yfeJ [H]
Synonym: A9601_13021
Alternate gene names: 123968835
Gene position: 1085475-1086212 (Clockwise)
Preceding gene: 123968834
Following gene: 123968837
Centisome position: 65.0
GC content: 31.71
Gene sequence:
>738_bases ATGAAGGAAATAAAACGCCTGTTAGTTTTGCAGCATTTAGAAATAGAGGGGCCTGGTCTTTTTGAGCAATTTGCTAAAGA AAGAGATTTTAAAATAGAAATTATTCGTTTAGATAATAAAAATGCTCTGCCGCAAACAAAAAAAGGTGACTTAATTTTAA TTATGGGTGGACCAATGGGTGTTAAAGATATTGGAAGCGGAAAATATCCATGGCTTAAATTAGAAAGAGATTTTATAAAA AAAGAATTAGAAAATGAGAGACCTATAATCGGTGTTTGCTTAGGTGCTCAATTGCTTGCGAGTGCTGCTGGGGGAGATGT AGAAATTCTTAAATATGGATCACCTCCAAAAGCATTACCAGAAATTGGATGGTCTCAAATTTTTATAGACAAATCGAATA AAGACTTTAAAGCACTGTTTGAAGACCCTTTTCATGTACTACATTGGCATGGAGATAGGATTTTGTTACCTAATAAAGCA GTACTCATTGCTAGTAGTGCACGTTGTAAGGAACAGTTTTTTAGGATTGGTAATTTTGCTTACGGATTACAATTCCATAT AGAGACGACGGGAGTAATGATAAATAACTGGATTAAAGAAGATAAAGAGTTTGTCCTTAAAGGATTAGGCTTAAATGGTC AGGAAATTTTAGAAGAAGAGAATAAAAAATATATTGATAAAACTTTTTCAAAAAGAAAGCTTCTAATAAGTAAATTATTT GAATTATTAGATAATTAA
Upstream 100 bases:
>100_bases TAAGTATTGCAGCAGGTACATACCAAGAAGATACTTGGTCGGCAATGAAGTGGTTTAGCGTTAATGTCTGTTCTGAATCA GCTGAAATAATGGAAAGTGA
Downstream 100 bases:
>100_bases AAAGGGCATAATCAATTAAAAAAGGACTTGATAAAACCCCTGAAAAAATTTAAAAAGGATTTTTATTAGAAAATACCTGG AAGAATTTGACCAGTAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MKEIKRLLVLQHLEIEGPGLFEQFAKERDFKIEIIRLDNKNALPQTKKGDLILIMGGPMGVKDIGSGKYPWLKLERDFIK KELENERPIIGVCLGAQLLASAAGGDVEILKYGSPPKALPEIGWSQIFIDKSNKDFKALFEDPFHVLHWHGDRILLPNKA VLIASSARCKEQFFRIGNFAYGLQFHIETTGVMINNWIKEDKEFVLKGLGLNGQEILEEENKKYIDKTFSKRKLLISKLF ELLDN
Sequences:
>Translated_245_residues MKEIKRLLVLQHLEIEGPGLFEQFAKERDFKIEIIRLDNKNALPQTKKGDLILIMGGPMGVKDIGSGKYPWLKLERDFIK KELENERPIIGVCLGAQLLASAAGGDVEILKYGSPPKALPEIGWSQIFIDKSNKDFKALFEDPFHVLHWHGDRILLPNKA VLIASSARCKEQFFRIGNFAYGLQFHIETTGVMINNWIKEDKEFVLKGLGLNGQEILEEENKKYIDKTFSKRKLLISKLF ELLDN >Mature_245_residues MKEIKRLLVLQHLEIEGPGLFEQFAKERDFKIEIIRLDNKNALPQTKKGDLILIMGGPMGVKDIGSGKYPWLKLERDFIK KELENERPIIGVCLGAQLLASAAGGDVEILKYGSPPKALPEIGWSQIFIDKSNKDFKALFEDPFHVLHWHGDRILLPNKA VLIASSARCKEQFFRIGNFAYGLQFHIETTGVMINNWIKEDKEFVLKGLGLNGQEILEEENKKYIDKTFSKRKLLISKLF ELLDN
Specific function: Unknown
COG id: COG0518
COG function: function code F; GMP synthase - Glutamine amidotransferase domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017926 - InterPro: IPR000991 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: NA
Molecular weight: Translated: 27992; Mature: 27992
Theoretical pI: Translated: 8.65; Mature: 8.65
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEIKRLLVLQHLEIEGPGLFEQFAKERDFKIEIIRLDNKNALPQTKKGDLILIMGGPMG CHHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCC VKDIGSGKYPWLKLERDFIKKELENERPIIGVCLGAQLLASAAGGDVEILKYGSPPKALP CCCCCCCCCCEEEECHHHHHHHHCCCCCEEEEEHHHHHHHHCCCCCEEEEEECCCCCHHH EIGWSQIFIDKSNKDFKALFEDPFHVLHWHGDRILLPNKAVLIASSARCKEQFFRIGNFA CCCCEEEEEECCCCHHHHHHCCCCEEEEECCCEEECCCCEEEEECCHHHHHHHHHHCCEE YGLQFHIETTGVMINNWIKEDKEFVLKGLGLNGQEILEEENKKYIDKTFSKRKLLISKLF EEEEEEEEECCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELLDN HHHCC >Mature Secondary Structure MKEIKRLLVLQHLEIEGPGLFEQFAKERDFKIEIIRLDNKNALPQTKKGDLILIMGGPMG CHHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCC VKDIGSGKYPWLKLERDFIKKELENERPIIGVCLGAQLLASAAGGDVEILKYGSPPKALP CCCCCCCCCCEEEECHHHHHHHHCCCCCEEEEEHHHHHHHHCCCCCEEEEEECCCCCHHH EIGWSQIFIDKSNKDFKALFEDPFHVLHWHGDRILLPNKAVLIASSARCKEQFFRIGNFA CCCCEEEEEECCCCHHHHHHCCCCEEEEECCCEEECCCCEEEEECCHHHHHHHHHHCCEE YGLQFHIETTGVMINNWIKEDKEFVLKGLGLNGQEILEEENKKYIDKTFSKRKLLISKLF EEEEEEEEECCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELLDN HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7612925; 11677609 [H]