| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968765
Identifier: 123968765
GI number: 123968765
Start: 1050254
End: 1051825
Strand: Direct
Name: 123968765
Synonym: A9601_12321
Alternate gene names: NA
Gene position: 1050254-1051825 (Clockwise)
Preceding gene: 123968764
Following gene: 123968777
Centisome position: 62.89
GC content: 32.63
Gene sequence:
>1572_bases TTGACAAAAAAATTCTTCACATTTATAAAGCGCGGTCAATCTAAGAATTTAATTTATATAGTAATAATTTCTATTTTTTC TGGTTATAGTTTTCAAAAGACGATAGCTGCGAACAATGAAACTAACATCACCGTTGGTCTAACATGCGGAATAATAGGTT GGAATAATGGAAAATGGGAGGAGCTTTCTTTAAATAGTGGACACTTAGATGCTCCTTGGTATACAGGTAAAAAAGGAGGG AATAGTTGGACAGAAAATGAAAATAATAAAGCTTCAAGGATATGGTCTGATAAATATTTTGAACAAAATTCCATCAATTG GGTAAGATTTGCATATTTTTCAGATGAAGTTACCCAACCCACAAGAACGATGGTTCGTCATCATAGATGGAAAAATTCTA CTTCTAGTCAATTTACTTGGACTGATGATAATAGAGCTCAAAATTGGGCACAGTATATAGGCAACTGCTCAACTGAGAAT GGTATACCTGATGTTGGCATTCCAAATGAAGATATTGAGTTGTTGGCAAAAAATATAGTCTTAGAAGTATCAAATACTAG AGAAAACAACTATAAAATGGCACTAAACTTTTTACCGAAAAGTTTATTTGCGACAGGAGGAAAAGCTATTCAGGCTTATC AAAACGACCTCGTAACTGCAGTTAAAAAGAAATCAAAAAATAATAAAAAAGAAAAGGTTTCAATATGGACGTCAATATTT AGTGGAAATAACTCACCTTTTGATTTCAATACTAATAATTTTGGAGAATATGGGAATTGGAAAAGTGATCATAATGGTTT TCTTATTGGTCTAACTAATGAAGTTGGTTCAAATAAATTTATTTCTATATTTGGAAATAATGGTTCTGTTAAAGTCGATT TCCTCGATCAAGGAGGAGGAACATATAAACCTAAAGGGAATGGTTTTGGAATTGTAATTGGTAAAGAATCAGAAAAAAAT TATTCGCATTTTCTTTTTAGTAATACTAGCTTTAGTGGAAAACACAATCGCGGACTTATTCCGGTTGGTGACTTTGCTGG TGGATCTGCGAGCGGGAATAAAAGCATAACTTCTTATGTTTTTGATCTAACAATTGGCAAGAGAAAAGAGGTAAATGGAT TTCTCATTAATCCTGAAATAAGTGGCACCTGGAATCAAAATATAGATCATGAATGGAAAGAGTCAGGAGGTGATCCATTT AATCTTCAGTACAACGAATACAAAGATAATTTTCTTCTCACAGAAATCTCGATTGCCATATCAAAAAAGGCTAAAGTTTA TGAGAAATTCATATTAACTCCAACAATTAAAGCTGGATGGATTGTTGATTGGGATTTAAATAATAAGCCAGCAACAATTA CTAATCTCGAAAATAGCCAAACAATAACTATTAAACCTGATGAACAAAACCAGCAAGGAATATTAATAGAGAGTTCCATA AAACTAGGTCCAACGAAAGATAGTGAGTCTAAGCTTGAGGCTGAAGTTTCATATGGAATAAAACTTTGGGAATCAAACCA AAAGTTTTCTGATTGGAGAGCCGCAATAGGAGTGTCTTATTTTTTCGATTAA
Upstream 100 bases:
>100_bases ATAAAAAATCTTATTTTCTAAAATTTATGATTCTAAATTTTAAAAATACTAATAATATGTATAAATAAGAACCTGAATTG TTATTCTTAAAGATATTTTA
Downstream 100 bases:
>100_bases TAAAAGATTATCATTTTTTAAAAAATATTATTTTTTTTGATCTAGTTAAGGACCTCATGAAATTTAAAACTATAAGTCCT CAATAATCCCATAAGTCACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 523; Mature: 522
Protein sequence:
>523_residues MTKKFFTFIKRGQSKNLIYIVIISIFSGYSFQKTIAANNETNITVGLTCGIIGWNNGKWEELSLNSGHLDAPWYTGKKGG NSWTENENNKASRIWSDKYFEQNSINWVRFAYFSDEVTQPTRTMVRHHRWKNSTSSQFTWTDDNRAQNWAQYIGNCSTEN GIPDVGIPNEDIELLAKNIVLEVSNTRENNYKMALNFLPKSLFATGGKAIQAYQNDLVTAVKKKSKNNKKEKVSIWTSIF SGNNSPFDFNTNNFGEYGNWKSDHNGFLIGLTNEVGSNKFISIFGNNGSVKVDFLDQGGGTYKPKGNGFGIVIGKESEKN YSHFLFSNTSFSGKHNRGLIPVGDFAGGSASGNKSITSYVFDLTIGKRKEVNGFLINPEISGTWNQNIDHEWKESGGDPF NLQYNEYKDNFLLTEISIAISKKAKVYEKFILTPTIKAGWIVDWDLNNKPATITNLENSQTITIKPDEQNQQGILIESSI KLGPTKDSESKLEAEVSYGIKLWESNQKFSDWRAAIGVSYFFD
Sequences:
>Translated_523_residues MTKKFFTFIKRGQSKNLIYIVIISIFSGYSFQKTIAANNETNITVGLTCGIIGWNNGKWEELSLNSGHLDAPWYTGKKGG NSWTENENNKASRIWSDKYFEQNSINWVRFAYFSDEVTQPTRTMVRHHRWKNSTSSQFTWTDDNRAQNWAQYIGNCSTEN GIPDVGIPNEDIELLAKNIVLEVSNTRENNYKMALNFLPKSLFATGGKAIQAYQNDLVTAVKKKSKNNKKEKVSIWTSIF SGNNSPFDFNTNNFGEYGNWKSDHNGFLIGLTNEVGSNKFISIFGNNGSVKVDFLDQGGGTYKPKGNGFGIVIGKESEKN YSHFLFSNTSFSGKHNRGLIPVGDFAGGSASGNKSITSYVFDLTIGKRKEVNGFLINPEISGTWNQNIDHEWKESGGDPF NLQYNEYKDNFLLTEISIAISKKAKVYEKFILTPTIKAGWIVDWDLNNKPATITNLENSQTITIKPDEQNQQGILIESSI KLGPTKDSESKLEAEVSYGIKLWESNQKFSDWRAAIGVSYFFD >Mature_522_residues TKKFFTFIKRGQSKNLIYIVIISIFSGYSFQKTIAANNETNITVGLTCGIIGWNNGKWEELSLNSGHLDAPWYTGKKGGN SWTENENNKASRIWSDKYFEQNSINWVRFAYFSDEVTQPTRTMVRHHRWKNSTSSQFTWTDDNRAQNWAQYIGNCSTENG IPDVGIPNEDIELLAKNIVLEVSNTRENNYKMALNFLPKSLFATGGKAIQAYQNDLVTAVKKKSKNNKKEKVSIWTSIFS GNNSPFDFNTNNFGEYGNWKSDHNGFLIGLTNEVGSNKFISIFGNNGSVKVDFLDQGGGTYKPKGNGFGIVIGKESEKNY SHFLFSNTSFSGKHNRGLIPVGDFAGGSASGNKSITSYVFDLTIGKRKEVNGFLINPEISGTWNQNIDHEWKESGGDPFN LQYNEYKDNFLLTEISIAISKKAKVYEKFILTPTIKAGWIVDWDLNNKPATITNLENSQTITIKPDEQNQQGILIESSIK LGPTKDSESKLEAEVSYGIKLWESNQKFSDWRAAIGVSYFFD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58907; Mature: 58776
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKKFFTFIKRGQSKNLIYIVIISIFSGYSFQKTIAANNETNITVGLTCGIIGWNNGKWE CCHHHHHHHHCCCCCCEEEEEEEEHHCCCCEEEEEECCCCCEEEEEEEEEEEECCCCCEE ELSLNSGHLDAPWYTGKKGGNSWTENENNKASRIWSDKYFEQNSINWVRFAYFSDEVTQP EEECCCCCCCCCEECCCCCCCCCCCCCCCCHHEEECHHCCCCCCCCEEEEEEECCCCCCH TRTMVRHHRWKNSTSSQFTWTDDNRAQNWAQYIGNCSTENGIPDVGIPNEDIELLAKNIV HHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHEEEEEE LEVSNTRENNYKMALNFLPKSLFATGGKAIQAYQNDLVTAVKKKSKNNKKEKVSIWTSIF EEEECCCCCCEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEE SGNNSPFDFNTNNFGEYGNWKSDHNGFLIGLTNEVGSNKFISIFGNNGSVKVDFLDQGGG CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCEEEEEEEECCCC TYKPKGNGFGIVIGKESEKNYSHFLFSNTSFSGKHNRGLIPVGDFAGGSASGNKSITSYV CCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEE FDLTIGKRKEVNGFLINPEISGTWNQNIDHEWKESGGDPFNLQYNEYKDNFLLTEISIAI EEEECCCCCCCCCEEECCCCCCCCCCCCCCHHHHCCCCEEEEEECCCCCCEEEEEEEEEE SKKAKVYEKFILTPTIKAGWIVDWDLNNKPATITNLENSQTITIKPDEQNQQGILIESSI CCHHHHHHHEEECCCCCCCEEEEECCCCCCEEEEECCCCEEEEECCCCCCCCCEEEEECE KLGPTKDSESKLEAEVSYGIKLWESNQKFSDWRAAIGVSYFFD ECCCCCCCCHHEEEEEEECEEEEECCCCHHHHHHHEEEEEECC >Mature Secondary Structure TKKFFTFIKRGQSKNLIYIVIISIFSGYSFQKTIAANNETNITVGLTCGIIGWNNGKWE CHHHHHHHHCCCCCCEEEEEEEEHHCCCCEEEEEECCCCCEEEEEEEEEEEECCCCCEE ELSLNSGHLDAPWYTGKKGGNSWTENENNKASRIWSDKYFEQNSINWVRFAYFSDEVTQP EEECCCCCCCCCEECCCCCCCCCCCCCCCCHHEEECHHCCCCCCCCEEEEEEECCCCCCH TRTMVRHHRWKNSTSSQFTWTDDNRAQNWAQYIGNCSTENGIPDVGIPNEDIELLAKNIV HHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHEEEEEE LEVSNTRENNYKMALNFLPKSLFATGGKAIQAYQNDLVTAVKKKSKNNKKEKVSIWTSIF EEEECCCCCCEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEE SGNNSPFDFNTNNFGEYGNWKSDHNGFLIGLTNEVGSNKFISIFGNNGSVKVDFLDQGGG CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCEEEEEEEECCCC TYKPKGNGFGIVIGKESEKNYSHFLFSNTSFSGKHNRGLIPVGDFAGGSASGNKSITSYV CCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEE FDLTIGKRKEVNGFLINPEISGTWNQNIDHEWKESGGDPFNLQYNEYKDNFLLTEISIAI EEEECCCCCCCCCEEECCCCCCCCCCCCCCHHHHCCCCEEEEEECCCCCCEEEEEEEEEE SKKAKVYEKFILTPTIKAGWIVDWDLNNKPATITNLENSQTITIKPDEQNQQGILIESSI CCHHHHHHHEEECCCCCCCEEEEECCCCCCEEEEECCCCEEEEECCCCCCCCCEEEEECE KLGPTKDSESKLEAEVSYGIKLWESNQKFSDWRAAIGVSYFFD ECCCCCCCCHHEEEEEEECEEEEECCCCHHHHHHHEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA