| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968718
Identifier: 123968718
GI number: 123968718
Start: 999729
End: 1000163
Strand: Direct
Name: 123968718
Synonym: A9601_11851
Alternate gene names: NA
Gene position: 999729-1000163 (Clockwise)
Preceding gene: 123968717
Following gene: 123968720
Centisome position: 59.87
GC content: 28.74
Gene sequence:
>435_bases ATGAGTTTAAAATTATCTAATATTTTTGCAATTCCTCTAATTTTTTTATCTATTTTATTTGATACAAATAATGAATTTAA TAAAGTAAATGCAAATGTTAAAAATTCGCCTGCCAATAAAAATGATTTAGATTTATATCATGGGATGGGTGTTTCATTTC TATGTAATGCGACAAGAAAAGGATTTGATCTGGATTTCCCAAAAACATTAAGTGTTGCTTCAGCAACCTTCGCATCAGTA GTATCGCAAAAACATGGAGGGAAAATAATAGAAAAAAAGAAAGAACAAACAGTTGATATGAAACAATTACAATTTATTGC ATCCCTGCAATTAGTTGAATCAGCTCTTAAAGTGTGCCCAGATAATGTTCCTGAAAAGATCGAAAAACAATTTAAGATTG AAACTGAGAGAATCAAGAAATTACAAGGTTTGTAA
Upstream 100 bases:
>100_bases TCATCACGAAATTAAAATTATTAAATAAATACTGTGGGCAGATTTAGTTTAAAAATAAAAAATGTTATCTTTAATAATGT GAATTAAAAATAAATCAAAT
Downstream 100 bases:
>100_bases AAAATAAATTTTTTTATCTAAACATAGAACTAACAGAACTTTCTTCGTGAATTCTCCAAATGGCTTCCCCAAGCATATTT GCGACAGAAAGAACTTTTAA
Product: Villin headpiece domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MSLKLSNIFAIPLIFLSILFDTNNEFNKVNANVKNSPANKNDLDLYHGMGVSFLCNATRKGFDLDFPKTLSVASATFASV VSQKHGGKIIEKKKEQTVDMKQLQFIASLQLVESALKVCPDNVPEKIEKQFKIETERIKKLQGL
Sequences:
>Translated_144_residues MSLKLSNIFAIPLIFLSILFDTNNEFNKVNANVKNSPANKNDLDLYHGMGVSFLCNATRKGFDLDFPKTLSVASATFASV VSQKHGGKIIEKKKEQTVDMKQLQFIASLQLVESALKVCPDNVPEKIEKQFKIETERIKKLQGL >Mature_143_residues SLKLSNIFAIPLIFLSILFDTNNEFNKVNANVKNSPANKNDLDLYHGMGVSFLCNATRKGFDLDFPKTLSVASATFASVV SQKHGGKIIEKKKEQTVDMKQLQFIASLQLVESALKVCPDNVPEKIEKQFKIETERIKKLQGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16103; Mature: 15972
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLKLSNIFAIPLIFLSILFDTNNEFNKVNANVKNSPANKNDLDLYHGMGVSFLCNATRK CCCCHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCHHHHCCCHHHHHHCCCC GFDLDFPKTLSVASATFASVVSQKHGGKIIEKKKEQTVDMKQLQFIASLQLVESALKVCP CCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DNVPEKIEKQFKIETERIKKLQGL CCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SLKLSNIFAIPLIFLSILFDTNNEFNKVNANVKNSPANKNDLDLYHGMGVSFLCNATRK CCCHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCHHHHCCCHHHHHHCCCC GFDLDFPKTLSVASATFASVVSQKHGGKIIEKKKEQTVDMKQLQFIASLQLVESALKVCP CCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DNVPEKIEKQFKIETERIKKLQGL CCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA