| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968715
Identifier: 123968715
GI number: 123968715
Start: 997224
End: 997766
Strand: Direct
Name: 123968715
Synonym: A9601_11821
Alternate gene names: NA
Gene position: 997224-997766 (Clockwise)
Preceding gene: 123968711
Following gene: 123968717
Centisome position: 59.72
GC content: 33.15
Gene sequence:
>543_bases ATGAACAAACCTCAAGAATCAGAAGATCATTATAAAGACAATGATTACAGGACAATTGAGCAGACGATGGAGAAGTTTTC CGGTGGGACAAGACGACTGGCAGCTCAACTTACAACTTCTGCAAGTTTTGATTCTTTGTGGAGTGTTTTAACAGATTATG ATCGTTTAAATCTCTACATACCAAATCTTTTATCAAGCAAAAAAATATTTCAGAAGGGAAATAATGTCCACCTTAAGCAA GTTGGGGCTCAGGATTTCCTTGGCATGAAGTTTTCAGCTGAAGTAACTATAGATTTATTTGAAAATAAGGAGCTTGGCCT CTTAAAATTTAATTTAATAAAAGGAGATTTCAGAAAGTTTGAGGGTAGTTGGAAAATTCAAAATATTAAAAATACTTCAA CAAACTCATTAATTTATGATCTTACTGTTCAAGGTTGTCAGTGGATGCCAATAGGGATGATAGAGAAAAGACTGAAAAAA GATCTTTCAGAAAATTTAATTGCCGTAGATAAGCAAGCAAAATCATCAAGAAGATCGTTATAA
Upstream 100 bases:
>100_bases GGGATAAATAAAAGAAATTATTTTAATTTTTCAGTATTTATTGTTTTTATCAGTATAGTTACACAGAAATAATTTTTTAT CTAATTAAAAAATTCATTGC
Downstream 100 bases:
>100_bases ATTTAAATTAATAGCCCCAAGGGGATTCGAACCCCTGTCGCCTCCGTGAAAGGGAGGTGTCCTAGGCCTCTAGACGATGG GGCCAGGAAATTAGCATAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MNKPQESEDHYKDNDYRTIEQTMEKFSGGTRRLAAQLTTSASFDSLWSVLTDYDRLNLYIPNLLSSKKIFQKGNNVHLKQ VGAQDFLGMKFSAEVTIDLFENKELGLLKFNLIKGDFRKFEGSWKIQNIKNTSTNSLIYDLTVQGCQWMPIGMIEKRLKK DLSENLIAVDKQAKSSRRSL
Sequences:
>Translated_180_residues MNKPQESEDHYKDNDYRTIEQTMEKFSGGTRRLAAQLTTSASFDSLWSVLTDYDRLNLYIPNLLSSKKIFQKGNNVHLKQ VGAQDFLGMKFSAEVTIDLFENKELGLLKFNLIKGDFRKFEGSWKIQNIKNTSTNSLIYDLTVQGCQWMPIGMIEKRLKK DLSENLIAVDKQAKSSRRSL >Mature_180_residues MNKPQESEDHYKDNDYRTIEQTMEKFSGGTRRLAAQLTTSASFDSLWSVLTDYDRLNLYIPNLLSSKKIFQKGNNVHLKQ VGAQDFLGMKFSAEVTIDLFENKELGLLKFNLIKGDFRKFEGSWKIQNIKNTSTNSLIYDLTVQGCQWMPIGMIEKRLKK DLSENLIAVDKQAKSSRRSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20738; Mature: 20738
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKPQESEDHYKDNDYRTIEQTMEKFSGGTRRLAAQLTTSASFDSLWSVLTDYDRLNLYI CCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEC PNLLSSKKIFQKGNNVHLKQVGAQDFLGMKFSAEVTIDLFENKELGLLKFNLIKGDFRKF CCHHHHHHHHHCCCCEEEEECCCHHHCCCEEEEEEEEEEECCCCCCEEEEEEEHHHHHHC EGSWKIQNIKNTSTNSLIYDLTVQGCQWMPIGMIEKRLKKDLSENLIAVDKQAKSSRRSL CCCEEEEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHEEHHHHHHHHHCCC >Mature Secondary Structure MNKPQESEDHYKDNDYRTIEQTMEKFSGGTRRLAAQLTTSASFDSLWSVLTDYDRLNLYI CCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEC PNLLSSKKIFQKGNNVHLKQVGAQDFLGMKFSAEVTIDLFENKELGLLKFNLIKGDFRKF CCHHHHHHHHHCCCCEEEEECCCHHHCCCEEEEEEEEEEECCCCCCEEEEEEEHHHHHHC EGSWKIQNIKNTSTNSLIYDLTVQGCQWMPIGMIEKRLKKDLSENLIAVDKQAKSSRRSL CCCEEEEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHEEHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA