| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968685
Identifier: 123968685
GI number: 123968685
Start: 966978
End: 968528
Strand: Direct
Name: 123968685
Synonym: A9601_11521
Alternate gene names: NA
Gene position: 966978-968528 (Clockwise)
Preceding gene: 123968683
Following gene: 123968696
Centisome position: 57.91
GC content: 27.34
Gene sequence:
>1551_bases GTGAAATACATTTTTATAATTTTTTTTAGTTTTTGTGGTTTATTTTTTAATAATGGTTTAAAGGCTGCTGAAAAGATAAA TATTAAGTTTGAAGAGATGGAAATCCCTCTTACTATAGAACAATTATCAAAATTAGAAAAATACAAAGATAATTCAACAG AATTAATAGATTGGTTAAAAAAAAATGGATTTATAAGAGTTTTTGAATTATCAAAGTTTTTAGAATTTCCAGTTTTCAAA GAAGATGGATTAAATAGAGAAATATTAAGAAGTTGGATAGGGCGTAAAATTCTTACAGAATTAAGCAAAAGCATTAAAGT TCCAAATGACAATAATGGAACAGAAATATATAACACTATAGAAAATTTATTAGATCAAAAAAAACAAATTTCAACTTTAG ACATCATAAAGGCATTACCATCAGAAGAAATTTCACTGGATATTGATAATCTAATTTTAATAATTTCATCTTGGAAAAAT GAATTATCAATGCAACAAGAACTGTTGTCCAAATTAAATCAACTTGAAAGAACTAAACAAAATGTCTCTAAAAATACTGA AAAAAAATCAATTGAAGATCTAATAAAAATTGAAAAAAAAATTTATGCTCCTCACCGAGTGAAACCTTTTGAAATTGAAA TATGGAAAAGCAATAAAACAAATTCTGATAGAGAATTAATAATATTTATGCCAGGACTTGGAGGAGAAATTAATAATTTC AAATGGATAGGTAACGAATTAGCTAGAAGAGGCTGGCCAATATTATTCATAGATCATAGAGGAAGTAATTTAGAATCATT CATAGAAGTACTCGATGGTAAGGAAACAATACCAGGAAGTGCAGACTTTTACTTATATAGAATTAAAGATTTAGATGCTG TATTGAAAGCTCATGAAAATGGAGAATTTGATTTACCTAATAATTCTTACATTTTAATGGGGCATTCACTTGGTGCTTTA ATAGCACTTTTATATGAAGGCAAGAAACCTACTGATCAACTAGAGGAAAAATGTGATTTGGCATTAAAAGACTTTGCGGT TACAAATTTATCAAAATTACTTCAATGTCAGTTGAGTGAAATACCATTCCCTAAGAACAATAACACTAATAAGGCCAGTG CCATAGTAGGCTTTAATTCATTTGGAAGTCTAGTATGGCCAAAAGAAAATAGTACAGGCATTAAGGTACCAACTCTTCTA ATAGGAGGTACTTATGACCTTATTACACCGTTAATGAATGAACAATTTAAAGTTTTTTATGCTTTAGATAATCCATCAAA TAGATTTCTAATTATTGAAGGAGCAAGTCATTTCTCTCCAATAAGAATTAATAAAAGCTATGAAAAAAATAATGACCTCT TCAAAATAAGTGAATCTTTTATTGGTTCAGAGCCAATATTAGTACAAGATTTATCTACTAAATTTATAGTTGAATTTTTA AAAAATATTAAAGACCAAAAGATCCCTAATGTAGTTAAAAACCAAAGAGATTTGGGACTTGACTTCCATTTTTTAGATCT TGAAACGATAAAAGAAATTTCCGAAAATTAG
Upstream 100 bases:
>100_bases AATGCAGCGAAAAATCTTATCTTAGTTATTAACCTCAAATGATAAGGAAATTGAATCCACCAATTTTTGCTAATTTGTAA ACTATTTGGACTAATCACTA
Downstream 100 bases:
>100_bases TACTCTATTCGTGGATCTAAATATGCGATTAAAATATCCACTAAGAGATTTAGAGAGACTATAAGCATAGAGGTAAAAAT TACAATTCCTTGAACCAAAG
Product: putative dienelactone hydrolase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 516; Mature: 516
Protein sequence:
>516_residues MKYIFIIFFSFCGLFFNNGLKAAEKINIKFEEMEIPLTIEQLSKLEKYKDNSTELIDWLKKNGFIRVFELSKFLEFPVFK EDGLNREILRSWIGRKILTELSKSIKVPNDNNGTEIYNTIENLLDQKKQISTLDIIKALPSEEISLDIDNLILIISSWKN ELSMQQELLSKLNQLERTKQNVSKNTEKKSIEDLIKIEKKIYAPHRVKPFEIEIWKSNKTNSDRELIIFMPGLGGEINNF KWIGNELARRGWPILFIDHRGSNLESFIEVLDGKETIPGSADFYLYRIKDLDAVLKAHENGEFDLPNNSYILMGHSLGAL IALLYEGKKPTDQLEEKCDLALKDFAVTNLSKLLQCQLSEIPFPKNNNTNKASAIVGFNSFGSLVWPKENSTGIKVPTLL IGGTYDLITPLMNEQFKVFYALDNPSNRFLIIEGASHFSPIRINKSYEKNNDLFKISESFIGSEPILVQDLSTKFIVEFL KNIKDQKIPNVVKNQRDLGLDFHFLDLETIKEISEN
Sequences:
>Translated_516_residues MKYIFIIFFSFCGLFFNNGLKAAEKINIKFEEMEIPLTIEQLSKLEKYKDNSTELIDWLKKNGFIRVFELSKFLEFPVFK EDGLNREILRSWIGRKILTELSKSIKVPNDNNGTEIYNTIENLLDQKKQISTLDIIKALPSEEISLDIDNLILIISSWKN ELSMQQELLSKLNQLERTKQNVSKNTEKKSIEDLIKIEKKIYAPHRVKPFEIEIWKSNKTNSDRELIIFMPGLGGEINNF KWIGNELARRGWPILFIDHRGSNLESFIEVLDGKETIPGSADFYLYRIKDLDAVLKAHENGEFDLPNNSYILMGHSLGAL IALLYEGKKPTDQLEEKCDLALKDFAVTNLSKLLQCQLSEIPFPKNNNTNKASAIVGFNSFGSLVWPKENSTGIKVPTLL IGGTYDLITPLMNEQFKVFYALDNPSNRFLIIEGASHFSPIRINKSYEKNNDLFKISESFIGSEPILVQDLSTKFIVEFL KNIKDQKIPNVVKNQRDLGLDFHFLDLETIKEISEN >Mature_516_residues MKYIFIIFFSFCGLFFNNGLKAAEKINIKFEEMEIPLTIEQLSKLEKYKDNSTELIDWLKKNGFIRVFELSKFLEFPVFK EDGLNREILRSWIGRKILTELSKSIKVPNDNNGTEIYNTIENLLDQKKQISTLDIIKALPSEEISLDIDNLILIISSWKN ELSMQQELLSKLNQLERTKQNVSKNTEKKSIEDLIKIEKKIYAPHRVKPFEIEIWKSNKTNSDRELIIFMPGLGGEINNF KWIGNELARRGWPILFIDHRGSNLESFIEVLDGKETIPGSADFYLYRIKDLDAVLKAHENGEFDLPNNSYILMGHSLGAL IALLYEGKKPTDQLEEKCDLALKDFAVTNLSKLLQCQLSEIPFPKNNNTNKASAIVGFNSFGSLVWPKENSTGIKVPTLL IGGTYDLITPLMNEQFKVFYALDNPSNRFLIIEGASHFSPIRINKSYEKNNDLFKISESFIGSEPILVQDLSTKFIVEFL KNIKDQKIPNVVKNQRDLGLDFHFLDLETIKEISEN
Specific function: Unknown
COG id: COG4188
COG function: function code R; Predicted dienelactone hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59336; Mature: 59336
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYIFIIFFSFCGLFFNNGLKAAEKINIKFEEMEIPLTIEQLSKLEKYKDNSTELIDWLK CCEEEEEHHHHHHHHHCCCCCCHHHCCEEEEEEECCEEHHHHHHHHHHCCCHHHHHHHHH KNGFIRVFELSKFLEFPVFKEDGLNREILRSWIGRKILTELSKSIKVPNDNNGTEIYNTI CCCCEEEEEHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH ENLLDQKKQISTLDIIKALPSEEISLDIDNLILIISSWKNELSMQQELLSKLNQLERTKQ HHHHHHHHHHHHHHHHHHCCCCCCEEEHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH NVSKNTEKKSIEDLIKIEKKIYAPHRVKPFEIEIWKSNKTNSDRELIIFMPGLGGEINNF HHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCC KWIGNELARRGWPILFIDHRGSNLESFIEVLDGKETIPGSADFYLYRIKDLDAVLKAHEN CHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHCCC GEFDLPNNSYILMGHSLGALIALLYEGKKPTDQLEEKCDLALKDFAVTNLSKLLQCQLSE CCEECCCCCEEEEECCHHHHHHHHHCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH IPFPKNNNTNKASAIVGFNSFGSLVWPKENSTGIKVPTLLIGGTYDLITPLMNEQFKVFY CCCCCCCCCCCEEEEEEECCCCCEEECCCCCCCEEECEEEECCCHHHHHHHCCCCEEEEE ALDNPSNRFLIIEGASHFSPIRINKSYEKNNDLFKISESFIGSEPILVQDLSTKFIVEFL EEECCCCCEEEEECCCCCCEEEEECCCCCCCCEEEEHHHHCCCCCEEEECCHHHHHHHHH KNIKDQKIPNVVKNQRDLGLDFHFLDLETIKEISEN HHHHHCCCCHHHHCCHHCCCEEEEECHHHHHHHHCC >Mature Secondary Structure MKYIFIIFFSFCGLFFNNGLKAAEKINIKFEEMEIPLTIEQLSKLEKYKDNSTELIDWLK CCEEEEEHHHHHHHHHCCCCCCHHHCCEEEEEEECCEEHHHHHHHHHHCCCHHHHHHHHH KNGFIRVFELSKFLEFPVFKEDGLNREILRSWIGRKILTELSKSIKVPNDNNGTEIYNTI CCCCEEEEEHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH ENLLDQKKQISTLDIIKALPSEEISLDIDNLILIISSWKNELSMQQELLSKLNQLERTKQ HHHHHHHHHHHHHHHHHHCCCCCCEEEHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH NVSKNTEKKSIEDLIKIEKKIYAPHRVKPFEIEIWKSNKTNSDRELIIFMPGLGGEINNF HHHCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCC KWIGNELARRGWPILFIDHRGSNLESFIEVLDGKETIPGSADFYLYRIKDLDAVLKAHEN CHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHCCC GEFDLPNNSYILMGHSLGALIALLYEGKKPTDQLEEKCDLALKDFAVTNLSKLLQCQLSE CCEECCCCCEEEEECCHHHHHHHHHCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH IPFPKNNNTNKASAIVGFNSFGSLVWPKENSTGIKVPTLLIGGTYDLITPLMNEQFKVFY CCCCCCCCCCCEEEEEEECCCCCEEECCCCCCCEEECEEEECCCHHHHHHHCCCCEEEEE ALDNPSNRFLIIEGASHFSPIRINKSYEKNNDLFKISESFIGSEPILVQDLSTKFIVEFL EEECCCCCEEEEECCCCCCEEEEECCCCCCCCEEEEHHHHCCCCCEEEECCHHHHHHHHH KNIKDQKIPNVVKNQRDLGLDFHFLDLETIKEISEN HHHHHCCCCHHHHCCHHCCCEEEEECHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA