| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968673
Identifier: 123968673
GI number: 123968673
Start: 959033
End: 959269
Strand: Reverse
Name: 123968673
Synonym: A9601_11401
Alternate gene names: NA
Gene position: 959269-959033 (Counterclockwise)
Preceding gene: 123968680
Following gene: 123968672
Centisome position: 57.45
GC content: 37.97
Gene sequence:
>237_bases ATGAGTTCTAGTAATTGGCAATTTGTTTTTTTTAGATATTTCGCAAGCTTTCTTTTTATCCTCTCTCATAGTTTGCTGGT TCTTGATCATCTACCAGTAGGGGCGGCACTTCACGGACTTGGGGAAGTTTTTATTGCACCTTGGGCTTTTAGGGAAAGAG CATGGGATCTTGTTGTTATTGCAGTTTTATTTTTCTTCTTCGATATCTGGGGACTTATAAACACTCCTTGGAATTAA
Upstream 100 bases:
>100_bases ATCTTTATTCGTATTTATGGCTACCAAAAATAATATCTCTTGACTAGATCTATATCATTATTTTGATCATTGAAGTATAT TTCTTAAAAATCTAAAAAGC
Downstream 100 bases:
>100_bases CTGATATTATTTATTTACTAATTATTGGAAAATCATAATAAAAAATGATTTCATATTTTAATCAAATTTATAAAATAATT TTTCTTTTATTACTTACGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 78; Mature: 77
Protein sequence:
>78_residues MSSSNWQFVFFRYFASFLFILSHSLLVLDHLPVGAALHGLGEVFIAPWAFRERAWDLVVIAVLFFFFDIWGLINTPWN
Sequences:
>Translated_78_residues MSSSNWQFVFFRYFASFLFILSHSLLVLDHLPVGAALHGLGEVFIAPWAFRERAWDLVVIAVLFFFFDIWGLINTPWN >Mature_77_residues SSSNWQFVFFRYFASFLFILSHSLLVLDHLPVGAALHGLGEVFIAPWAFRERAWDLVVIAVLFFFFDIWGLINTPWN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9109; Mature: 8978
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSNWQFVFFRYFASFLFILSHSLLVLDHLPVGAALHGLGEVFIAPWAFRERAWDLVVI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHH AVLFFFFDIWGLINTPWN HHHHHHHHHHHHHCCCCC >Mature Secondary Structure SSSNWQFVFFRYFASFLFILSHSLLVLDHLPVGAALHGLGEVFIAPWAFRERAWDLVVI CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHH AVLFFFFDIWGLINTPWN HHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA