| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968652
Identifier: 123968652
GI number: 123968652
Start: 946260
End: 947030
Strand: Direct
Name: 123968652
Synonym: A9601_11191
Alternate gene names: NA
Gene position: 946260-947030 (Clockwise)
Preceding gene: 123968651
Following gene: 123968653
Centisome position: 56.67
GC content: 28.66
Gene sequence:
>771_bases ATGAAAGAAATTGGAGAGATAAAGTCAAATATATATAAAATAGCTGCTGTTACAGATAGAGGGCAAAGATTAAATAAATT AATTTCTCCTATGTATGAGGAAAAAGCTAATGAAATGGATGAATTGATTGATGCTCTTAAAGACTTTAGTTTTGAAATAT CAGAAAAATTATTGTCTGGAGAGTGGGAATTAATTTTTTCTAATGTTGAATTATTTCGAAGTTCTCCTTTCTTCCTTGCT ATTGAAAAGGCATTAAATGATGAATTTAAAAGTAATCTTTTTTTTAAATTACATCAATTGCAAGTAGGATCCTTTGGCAT ATCAACTATTGGGAGAATTGCTCAAAAGATTGATTTTGAAAAAAAAGAATTTATATCTACTTTTGACACTACAATATTTG GGCTTACAACTATTCCTATCTTAGGTTGGTTCAAACTATTGCCTACTTTTGGTGGAAGAGTAATAACCCTAGCAAGTGAT TTAGTTTTAAGAAATAATTTTCTTGATATGAAACTACAAAAGACAAAAGTTTCCAAAGTTGATGGACTTAATAAGATTCC ATTATTTAGTGAATTACTTATGGATAGATGGTATCCAGTTAAAGAGGTATGGAATAAGTTACCTTGGAATAAAGAATCGC CAAATTGCCAGGTTTCAATAGTATATTTAGACGATGAAATGAGAATTGTGCAGGATATGTATGGGTCTATTTTTATTTAT ATAAGACCTTCAATTTCCTTGTTGAATTCAAATTCAATCTCTAATGATTAA
Upstream 100 bases:
>100_bases TGGGGAGAATATTAATTGATTTTATTACCAGCATTATTAAAATTTCCATCAACATCAAATTAAATTCCTAAGATTAATTA GTATTTCTTGTATTGGAGTT
Downstream 100 bases:
>100_bases TTAAAACACTGAATAATAATTTTGTTATTTATAGAGAAAACCATTAAAAATTTATTTTAAAGATTAATTAATAAAAACTT CTCACATCTTAAATATAAAT
Product: pili assembly chaperone
Products: NA
Alternate protein names: Gram-Negative Pili Assembly Chaperone
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MKEIGEIKSNIYKIAAVTDRGQRLNKLISPMYEEKANEMDELIDALKDFSFEISEKLLSGEWELIFSNVELFRSSPFFLA IEKALNDEFKSNLFFKLHQLQVGSFGISTIGRIAQKIDFEKKEFISTFDTTIFGLTTIPILGWFKLLPTFGGRVITLASD LVLRNNFLDMKLQKTKVSKVDGLNKIPLFSELLMDRWYPVKEVWNKLPWNKESPNCQVSIVYLDDEMRIVQDMYGSIFIY IRPSISLLNSNSISND
Sequences:
>Translated_256_residues MKEIGEIKSNIYKIAAVTDRGQRLNKLISPMYEEKANEMDELIDALKDFSFEISEKLLSGEWELIFSNVELFRSSPFFLA IEKALNDEFKSNLFFKLHQLQVGSFGISTIGRIAQKIDFEKKEFISTFDTTIFGLTTIPILGWFKLLPTFGGRVITLASD LVLRNNFLDMKLQKTKVSKVDGLNKIPLFSELLMDRWYPVKEVWNKLPWNKESPNCQVSIVYLDDEMRIVQDMYGSIFIY IRPSISLLNSNSISND >Mature_256_residues MKEIGEIKSNIYKIAAVTDRGQRLNKLISPMYEEKANEMDELIDALKDFSFEISEKLLSGEWELIFSNVELFRSSPFFLA IEKALNDEFKSNLFFKLHQLQVGSFGISTIGRIAQKIDFEKKEFISTFDTTIFGLTTIPILGWFKLLPTFGGRVITLASD LVLRNNFLDMKLQKTKVSKVDGLNKIPLFSELLMDRWYPVKEVWNKLPWNKESPNCQVSIVYLDDEMRIVQDMYGSIFIY IRPSISLLNSNSISND
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29565; Mature: 29565
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEIGEIKSNIYKIAAVTDRGQRLNKLISPMYEEKANEMDELIDALKDFSFEISEKLLSG CCCHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC EWELIFSNVELFRSSPFFLAIEKALNDEFKSNLFFKLHQLQVGSFGISTIGRIAQKIDFE CCEEEEHHHHHHCCCCHHEEHHHHHHHHHHHHHHEEEEEHEECCCCHHHHHHHHHHHCCH KKEFISTFDTTIFGLTTIPILGWFKLLPTFGGRVITLASDLVLRNNFLDMKLQKTKVSKV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHCCCCCCEEHHHHHHHH DGLNKIPLFSELLMDRWYPVKEVWNKLPWNKESPNCQVSIVYLDDEMRIVQDMYGSIFIY CCCCCCCHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEEEEEEECCHHHHHHHHHCCEEEE IRPSISLLNSNSISND EECCEEEEECCCCCCC >Mature Secondary Structure MKEIGEIKSNIYKIAAVTDRGQRLNKLISPMYEEKANEMDELIDALKDFSFEISEKLLSG CCCHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC EWELIFSNVELFRSSPFFLAIEKALNDEFKSNLFFKLHQLQVGSFGISTIGRIAQKIDFE CCEEEEHHHHHHCCCCHHEEHHHHHHHHHHHHHHEEEEEHEECCCCHHHHHHHHHHHCCH KKEFISTFDTTIFGLTTIPILGWFKLLPTFGGRVITLASDLVLRNNFLDMKLQKTKVSKV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHCCCCCCEEHHHHHHHH DGLNKIPLFSELLMDRWYPVKEVWNKLPWNKESPNCQVSIVYLDDEMRIVQDMYGSIFIY CCCCCCCHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEEEEEEECCHHHHHHHHHCCEEEE IRPSISLLNSNSISND EECCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA