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The map label for this gene is 123968648

Identifier: 123968648

GI number: 123968648

Start: 944990

End: 945292

Strand: Reverse

Name: 123968648

Synonym: A9601_11151

Alternate gene names: NA

Gene position: 945292-944990 (Counterclockwise)

Preceding gene: 123968649

Following gene: 123968647

Centisome position: 56.61

GC content: 27.06

Gene sequence:

>303_bases
ATGTTTGATAATCTTGGAACTGCTCTAGTACAGGCATTAGGCTTCTTTACTGTTTTTGGTTTTTTTGTATATCAAACTTT
ATTTGCAGATAGCAAACCCAAAAATTCAAAATCAAATCCTAAAAAAACAAAGATTTCTGACAAAAAAGAATCAATTAAAA
AAGAACCTAAAAAAGGCTTATTTAATAGAAAATCTAAACCTGTTGAAGAGAATTTAACAGTCCAAAAAAAGGGATTATTT
GGGAGAAAAAAAGAAGTTTTTAAAGAAGAGATTAAACCAAAGAAAAAAGGTTGGTTTAAATAG

Upstream 100 bases:

>100_bases
TTCTCATAGTGAGAAGAAGGCAGAAATTGAATGCTTGTCTGATGATAAAAAATGTATAGAAGCGAAAGAAAAAGAATCAC
TATACAAAGTTGAGGCCTAA

Downstream 100 bases:

>100_bases
GTAAAGTTACTTAAACTCTTTTTTGATATCTTTTATACAAAAATTTTTTTTAGTAACTTTATAATTTAAAGAAGATAACA
CTCAAAATGAACCATAGAGA

Product: integrin alpha cytoplasmic region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MFDNLGTALVQALGFFTVFGFFVYQTLFADSKPKNSKSNPKKTKISDKKESIKKEPKKGLFNRKSKPVEENLTVQKKGLF
GRKKEVFKEEIKPKKKGWFK

Sequences:

>Translated_100_residues
MFDNLGTALVQALGFFTVFGFFVYQTLFADSKPKNSKSNPKKTKISDKKESIKKEPKKGLFNRKSKPVEENLTVQKKGLF
GRKKEVFKEEIKPKKKGWFK
>Mature_100_residues
MFDNLGTALVQALGFFTVFGFFVYQTLFADSKPKNSKSNPKKTKISDKKESIKKEPKKGLFNRKSKPVEENLTVQKKGLF
GRKKEVFKEEIKPKKKGWFK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11563; Mature: 11563

Theoretical pI: Translated: 10.95; Mature: 10.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDNLGTALVQALGFFTVFGFFVYQTLFADSKPKNSKSNPKKTKISDKKESIKKEPKKGL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHH
FNRKSKPVEENLTVQKKGLFGRKKEVFKEEIKPKKKGWFK
HCCCCCCCHHCCCHHHHCCCCHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MFDNLGTALVQALGFFTVFGFFVYQTLFADSKPKNSKSNPKKTKISDKKESIKKEPKKGL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHH
FNRKSKPVEENLTVQKKGLFGRKKEVFKEEIKPKKKGWFK
HCCCCCCCHHCCCHHHHCCCCHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA