| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968627
Identifier: 123968627
GI number: 123968627
Start: 936079
End: 936321
Strand: Reverse
Name: 123968627
Synonym: A9601_10941
Alternate gene names: NA
Gene position: 936321-936079 (Counterclockwise)
Preceding gene: 123968629
Following gene: 123968626
Centisome position: 56.07
GC content: 30.04
Gene sequence:
>243_bases TTGGACCCTTTAGACCCACTTACTGAAATTATTAATTCCGGTCAAGGTTTTTCACCTGCAATTGCTTTAGAAAGAATTAT TTGGGCAATGATTGGAATCTTTTTTTTAGGAGCAATTTCAAGATCAATAACTAATAGCATGCGAAGTCAAAATTGGTTTG GTAGAAATTTTTTATTTAGTTATTCTAAAGATAAAAAAAATACAGATAATACATCTTCACAACCTTCTAGTGATGAGGAA TAA
Upstream 100 bases:
>100_bases TTGTGTTTAATTTATATGGTGTTTTTGGTTATTTCTTTCATAAGTTTTAATTTTTCATCTATTAAACCATTTATAATTAA TATTATTAGTCAGTTTAAAT
Downstream 100 bases:
>100_bases GTTTTATAAATGAAAGAATCAATTTTTTCTAAAAAGAGAATTTTATTACTTGGTAGTGGCGAGCTTGGAAAAGAATTAGT AATAGAATCCAAAAGATTAG
Product: lectin subunit alpha
Products: NA
Alternate protein names: Legume Lectins Alpha Domain-Containing Protein
Number of amino acids: Translated: 80; Mature: 80
Protein sequence:
>80_residues MDPLDPLTEIINSGQGFSPAIALERIIWAMIGIFFLGAISRSITNSMRSQNWFGRNFLFSYSKDKKNTDNTSSQPSSDEE
Sequences:
>Translated_80_residues MDPLDPLTEIINSGQGFSPAIALERIIWAMIGIFFLGAISRSITNSMRSQNWFGRNFLFSYSKDKKNTDNTSSQPSSDEE >Mature_80_residues MDPLDPLTEIINSGQGFSPAIALERIIWAMIGIFFLGAISRSITNSMRSQNWFGRNFLFSYSKDKKNTDNTSSQPSSDEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8992; Mature: 8992
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPLDPLTEIINSGQGFSPAIALERIIWAMIGIFFLGAISRSITNSMRSQNWFGRNFLFS CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHC YSKDKKNTDNTSSQPSSDEE CCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDPLDPLTEIINSGQGFSPAIALERIIWAMIGIFFLGAISRSITNSMRSQNWFGRNFLFS CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHC YSKDKKNTDNTSSQPSSDEE CCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA