| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968624
Identifier: 123968624
GI number: 123968624
Start: 934423
End: 934584
Strand: Direct
Name: 123968624
Synonym: A9601_10911
Alternate gene names: NA
Gene position: 934423-934584 (Clockwise)
Preceding gene: 123968623
Following gene: 123968628
Centisome position: 55.96
GC content: 32.1
Gene sequence:
>162_bases ATGTTTGCTATTGCACTTGGAATGTCCCCTTTCGAAAAAATCACTGTTGCAATATCTGCTTCAATTTTTATAATTGCCTT TACATGGGTCTCGATCAAGGGAGATTTAAGAAAACTTGCCAATGAACTAATTGAAGATAATGAAAATAATCAGGATAATT AA
Upstream 100 bases:
>100_bases ATTATATTTTGATTAATTTTAAATATCATTGCAAAAAAAAAAAAAAAATCTAACTATTTAAAAAAATTCAATATAATAAA AAATTAGTATTTAGTTAGAA
Downstream 100 bases:
>100_bases AAAAAATCTTTTAACCTACTTTGCATGCAAGCTAGGATAATCAATAATATGCCTAATTTCTTTCAGAGAAGAGCCATAGA TTTTTTCACCATTTAAGTTA
Product: photosystem II reaction centre N protein
Products: NA
Alternate protein names: Photosystem II Reaction Center N Protein-Like
Number of amino acids: Translated: 53; Mature: 53
Protein sequence:
>53_residues MFAIALGMSPFEKITVAISASIFIIAFTWVSIKGDLRKLANELIEDNENNQDN
Sequences:
>Translated_53_residues MFAIALGMSPFEKITVAISASIFIIAFTWVSIKGDLRKLANELIEDNENNQDN >Mature_53_residues MFAIALGMSPFEKITVAISASIFIIAFTWVSIKGDLRKLANELIEDNENNQDN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5901; Mature: 5901
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFAIALGMSPFEKITVAISASIFIIAFTWVSIKGDLRKLANELIEDNENNQDN CEEEECCCCCHHHEEHHHHHHEEEEEEHHHCCCHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MFAIALGMSPFEKITVAISASIFIIAFTWVSIKGDLRKLANELIEDNENNQDN CEEEECCCCCHHHEEHHHHHHEEEEEEHHHCCCHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA