Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

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The map label for this gene is 123968587

Identifier: 123968587

GI number: 123968587

Start: 915211

End: 916005

Strand: Direct

Name: 123968587

Synonym: A9601_10541

Alternate gene names: NA

Gene position: 915211-916005 (Clockwise)

Preceding gene: 123968586

Following gene: 123968591

Centisome position: 54.81

GC content: 25.16

Gene sequence:

>795_bases
ATGAATTTAAGAAAATATCTAAAAGTTTATAAAAAATTCTTACATACTTCTTTGGCTTCTGAATTGGAGTATAAGACAAA
TATATTAGTTGATTTAACTACTGCAATTTTAAGTTTAGTAGGGAGTATTTTTCTTTTATCTATTTTTTTTCAAAATAATG
GAAATATTGGGGGATGGGAATTTGAACAGGCACTAATAATTCAAGGCATTTATACAATTTTGAATGGAATAACAAATACA
TGGTTCAATCCTAATCTTACAGAAATAGTTAAACATATAAGAGAAGGAACATTAGACTTCGTACTTTTAAAACCTATTGA
TAGTCAATTTTTCATTTCATTAAAAAAAATAAATCCATCTGGATTTTTAGAAATAATGCTTGGATTTTTCTTGTTGTTAT
TCTGCATGAGAATAAATCAAATAAATTTAAATTTAAGTTTTCTAACATTATCGTTAATTACGATAAGCTGCTCGATTTGT
ATTTTATATAGTCTATGGTTTTTTATTTCTACTACTACTATTTGGTTTGTTAAGACTTGGAATGCAATAGAAGTATTAAG
ATCATTTCTTTATATTGGAAGATTTCCTCTAAATTCATTTTCATTTTCTTTAAGAATATTTTTTAGTGTTTTCATTCCTA
TTGCTTTTATAACTACAATTCCTTCTGAAGTTTTTCTAGGCTTTTCTCAATTATGGAAAATAATGCTTGAAGTTATTGTT
GCTTCAGTATTTCTTATAACTTCAAGAAAATTCTGGTTATTTGCATTAAAGTTCTATTCATCAGCATCTAGCTAA

Upstream 100 bases:

>100_bases
GTGGAGGCTTAAGTATGCAAATTCTATGGATTTTTTTACTTTTCCCACTTTTTAAGAAAATCTGGTCTGAAGGAACCAAA
AAATATACAGCTATGGGGTC

Downstream 100 bases:

>100_bases
CTACTATTTAATGACCTCCCTGCAAAATTCCCAAATTTGTTGTTTACTTTTCAGATTAGAAAGTCTAGATAATTTCTTAA
AATAAGGTTTAGATTTTTCG

Product: membrane protein, multidrug efflux associated

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MNLRKYLKVYKKFLHTSLASELEYKTNILVDLTTAILSLVGSIFLLSIFFQNNGNIGGWEFEQALIIQGIYTILNGITNT
WFNPNLTEIVKHIREGTLDFVLLKPIDSQFFISLKKINPSGFLEIMLGFFLLLFCMRINQINLNLSFLTLSLITISCSIC
ILYSLWFFISTTTIWFVKTWNAIEVLRSFLYIGRFPLNSFSFSLRIFFSVFIPIAFITTIPSEVFLGFSQLWKIMLEVIV
ASVFLITSRKFWLFALKFYSSASS

Sequences:

>Translated_264_residues
MNLRKYLKVYKKFLHTSLASELEYKTNILVDLTTAILSLVGSIFLLSIFFQNNGNIGGWEFEQALIIQGIYTILNGITNT
WFNPNLTEIVKHIREGTLDFVLLKPIDSQFFISLKKINPSGFLEIMLGFFLLLFCMRINQINLNLSFLTLSLITISCSIC
ILYSLWFFISTTTIWFVKTWNAIEVLRSFLYIGRFPLNSFSFSLRIFFSVFIPIAFITTIPSEVFLGFSQLWKIMLEVIV
ASVFLITSRKFWLFALKFYSSASS
>Mature_264_residues
MNLRKYLKVYKKFLHTSLASELEYKTNILVDLTTAILSLVGSIFLLSIFFQNNGNIGGWEFEQALIIQGIYTILNGITNT
WFNPNLTEIVKHIREGTLDFVLLKPIDSQFFISLKKINPSGFLEIMLGFFLLLFCMRINQINLNLSFLTLSLITISCSIC
ILYSLWFFISTTTIWFVKTWNAIEVLRSFLYIGRFPLNSFSFSLRIFFSVFIPIAFITTIPSEVFLGFSQLWKIMLEVIV
ASVFLITSRKFWLFALKFYSSASS

Specific function: Unknown

COG id: COG3694

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30525; Mature: 30525

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLRKYLKVYKKFLHTSLASELEYKTNILVDLTTAILSLVGSIFLLSIFFQNNGNIGGWE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
FEQALIIQGIYTILNGITNTWFNPNLTEIVKHIREGTLDFVLLKPIDSQFFISLKKINPS
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEEEECCCHHHEEEEEECCCC
GFLEIMLGFFLLLFCMRINQINLNLSFLTLSLITISCSICILYSLWFFISTTTIWFVKTW
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEC
NAIEVLRSFLYIGRFPLNSFSFSLRIFFSVFIPIAFITTIPSEVFLGFSQLWKIMLEVIV
CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
ASVFLITSRKFWLFALKFYSSASS
HHHHHHHCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNLRKYLKVYKKFLHTSLASELEYKTNILVDLTTAILSLVGSIFLLSIFFQNNGNIGGWE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
FEQALIIQGIYTILNGITNTWFNPNLTEIVKHIREGTLDFVLLKPIDSQFFISLKKINPS
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEEEECCCHHHEEEEEECCCC
GFLEIMLGFFLLLFCMRINQINLNLSFLTLSLITISCSICILYSLWFFISTTTIWFVKTW
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEC
NAIEVLRSFLYIGRFPLNSFSFSLRIFFSVFIPIAFITTIPSEVFLGFSQLWKIMLEVIV
CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
ASVFLITSRKFWLFALKFYSSASS
HHHHHHHCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA