| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968567
Identifier: 123968567
GI number: 123968567
Start: 895046
End: 895426
Strand: Reverse
Name: 123968567
Synonym: A9601_10341
Alternate gene names: NA
Gene position: 895426-895046 (Counterclockwise)
Preceding gene: 123968568
Following gene: 123968566
Centisome position: 53.62
GC content: 21.78
Gene sequence:
>381_bases TTGCCAAATAAAATTACTATTTGGAAATTAAGGAATAATAATCCATTGAGAAAATCTTATGTTAACAACAATATTAAAGT AAACGAATTCGATGCCTTAATTAAAATCACTGTTGAAATGTCTAAATATTTATATCCTTATATCAGAGAGATACTAAAAT CTAAAGAAGATATTAAAAAGAATTCAATTATTTGGAATGATTTTAATAAGAGATTTATTGAGTTGATTAAAGAGAGATTT AATGTAGATAGTATTAGAGTGAAAAAGCTTTTAAATCAAGATGAAAATGATGAGACTATAATAAAATTTTTGCTTATTTT ATCTTTTTGTATTTCAAATCAGGGTTATCAAAAGTTGAAGAATTTTTTATACGATTTTTAA
Upstream 100 bases:
>100_bases AGAGAAGCTTGATTTATTATTATTAATCCTAGAAACTATTGATTTAAATGGTATTCAATCTCTTTACGCTATATCAAATA AACTTGATTTAAATGATGTT
Downstream 100 bases:
>100_bases TATGATGCAAAATAAATTGTCATTTCATCAATCTTCAGTAAGTCTCGAAATAATCGGATTGCCAGATTATTCTAATAATG AAAATAAAGATCAAATATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MPNKITIWKLRNNNPLRKSYVNNNIKVNEFDALIKITVEMSKYLYPYIREILKSKEDIKKNSIIWNDFNKRFIELIKERF NVDSIRVKKLLNQDENDETIIKFLLILSFCISNQGYQKLKNFLYDF
Sequences:
>Translated_126_residues MPNKITIWKLRNNNPLRKSYVNNNIKVNEFDALIKITVEMSKYLYPYIREILKSKEDIKKNSIIWNDFNKRFIELIKERF NVDSIRVKKLLNQDENDETIIKFLLILSFCISNQGYQKLKNFLYDF >Mature_125_residues PNKITIWKLRNNNPLRKSYVNNNIKVNEFDALIKITVEMSKYLYPYIREILKSKEDIKKNSIIWNDFNKRFIELIKERFN VDSIRVKKLLNQDENDETIIKFLLILSFCISNQGYQKLKNFLYDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15300; Mature: 15169
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNKITIWKLRNNNPLRKSYVNNNIKVNEFDALIKITVEMSKYLYPYIREILKSKEDIKK CCCCEEEEEECCCCCHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NSIIWNDFNKRFIELIKERFNVDSIRVKKLLNQDENDETIIKFLLILSFCISNQGYQKLK CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHH NFLYDF HHHCCC >Mature Secondary Structure PNKITIWKLRNNNPLRKSYVNNNIKVNEFDALIKITVEMSKYLYPYIREILKSKEDIKK CCCEEEEEECCCCCHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NSIIWNDFNKRFIELIKERFNVDSIRVKKLLNQDENDETIIKFLLILSFCISNQGYQKLK CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHH NFLYDF HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA