| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968557
Identifier: 123968557
GI number: 123968557
Start: 883856
End: 884419
Strand: Direct
Name: 123968557
Synonym: A9601_10241
Alternate gene names: NA
Gene position: 883856-884419 (Clockwise)
Preceding gene: 123968556
Following gene: 123968558
Centisome position: 52.93
GC content: 27.66
Gene sequence:
>564_bases ATGGAAGAAAATTTAGACAAAAATAATGAAGTAAATAAAGAAATACCTGACAAAACTACTAAATCAAACTCTGAGGAAAT AAAAGAGCCTAAATCAGAAAAAGCTATCATTTTGGATAAAAATGGTGATTCTGCTACTAAAATTGCTATTAAAAATGAAA TTAATACTCCAGAAAAACCTATAACAAAACCCAAAAAAGAACTCCCAGTAGAGAAAAAGCCTTTCCAAGAATTTATTAAC CTACACCTAATTCCTTCACTTACTGAGGAAATTAATCAAAGAGGATTAGAAATAAACAATATTAACCTCACTAACACAAA TAGACCTATTGCTGGTGATAAATGTTGGGTAATAAATTGTGAAATTAAAGATACATGTAACTTTTGGTTATCCTTTGAGA AGGATGACATTAGTTCATTAAAAAGTATTTCTTTATCAAAACCTAATCAAAAACCAAGTATTATTGAATCTTTTCTTATT GACGAAAAAAGGATTACCCTAAAATTAATTATTTCAAGAGTACTTCAAAGATTGAATGGGCAAAAGTTAATAGGAGTTAA TTAG
Upstream 100 bases:
>100_bases ATAGTAAAGATGACTGGGATAATGCTGATAATGATTGGTAGAAAAATAAATTAATTAAAAAATGTTTTTTTAATTTATAA TAAAATAAATAGTTTTTTTT
Downstream 100 bases:
>100_bases AAAAACAATAACACCAAGTTAACTTTTCCCTCGAAAATACAAATCATAGTAAATAATAGTATTAATAAACCTGATAAAAA TGGCTCAATCAACTGTTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MEENLDKNNEVNKEIPDKTTKSNSEEIKEPKSEKAIILDKNGDSATKIAIKNEINTPEKPITKPKKELPVEKKPFQEFIN LHLIPSLTEEINQRGLEINNINLTNTNRPIAGDKCWVINCEIKDTCNFWLSFEKDDISSLKSISLSKPNQKPSIIESFLI DEKRITLKLIISRVLQRLNGQKLIGVN
Sequences:
>Translated_187_residues MEENLDKNNEVNKEIPDKTTKSNSEEIKEPKSEKAIILDKNGDSATKIAIKNEINTPEKPITKPKKELPVEKKPFQEFIN LHLIPSLTEEINQRGLEINNINLTNTNRPIAGDKCWVINCEIKDTCNFWLSFEKDDISSLKSISLSKPNQKPSIIESFLI DEKRITLKLIISRVLQRLNGQKLIGVN >Mature_187_residues MEENLDKNNEVNKEIPDKTTKSNSEEIKEPKSEKAIILDKNGDSATKIAIKNEINTPEKPITKPKKELPVEKKPFQEFIN LHLIPSLTEEINQRGLEINNINLTNTNRPIAGDKCWVINCEIKDTCNFWLSFEKDDISSLKSISLSKPNQKPSIIESFLI DEKRITLKLIISRVLQRLNGQKLIGVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21347; Mature: 21347
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEENLDKNNEVNKEIPDKTTKSNSEEIKEPKSEKAIILDKNGDSATKIAIKNEINTPEKP CCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEECCCCCEEEEEEECCCCCCCCC ITKPKKELPVEKKPFQEFINLHLIPSLTEEINQRGLEINNINLTNTNRPIAGDKCWVINC CCCCHHHCCCCCCCHHHHHHEECCHHHHHHHHHCCCEECEEEECCCCCCCCCCEEEEEEE EIKDTCNFWLSFEKDDISSLKSISLSKPNQKPSIIESFLIDEKRITLKLIISRVLQRLNG EEECCCCEEEEECHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCC QKLIGVN CEEECCC >Mature Secondary Structure MEENLDKNNEVNKEIPDKTTKSNSEEIKEPKSEKAIILDKNGDSATKIAIKNEINTPEKP CCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEECCCCCEEEEEEECCCCCCCCC ITKPKKELPVEKKPFQEFINLHLIPSLTEEINQRGLEINNINLTNTNRPIAGDKCWVINC CCCCHHHCCCCCCCHHHHHHEECCHHHHHHHHHCCCEECEEEECCCCCCCCCCEEEEEEE EIKDTCNFWLSFEKDDISSLKSISLSKPNQKPSIIESFLIDEKRITLKLIISRVLQRLNG EEECCCCEEEEECHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCC QKLIGVN CEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA