| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
Click here to switch to the map view.
The map label for this gene is 123968519
Identifier: 123968519
GI number: 123968519
Start: 858850
End: 859233
Strand: Direct
Name: 123968519
Synonym: A9601_09861
Alternate gene names: NA
Gene position: 858850-859233 (Clockwise)
Preceding gene: 123968517
Following gene: 123968520
Centisome position: 51.43
GC content: 33.85
Gene sequence:
>384_bases ATGACCATAAATAATCAAAATCAGTTAAATGTCCTTGGAGAAGAAATTGAGATTTGTAGTTGCGCACCTATGACAGGGTG GTTCAGGGATGGATTTTGCAACTATGACAAAAATGATGGAGGGAATCATTCCATATGTTGTGTAATGGATGATAATTTCC TGAAATATAGTAAATCGCAAGGTAATGATTTAATAACTCCCATGCCTATTTATTCCTTCCCAGGACTAAAGGATGGTGAT CATTGGTGTATTTGTCTTGATAGGTGGAAGCAAGCATTATTAGACGGTCTTGCACCAAAAGTCATATTAGAATCAACTAA TATTGTCGTCTTAGAATCAGTACCTCTGGAAAAATTGAAAGAATATCAATTTAATAAAAATTAA
Upstream 100 bases:
>100_bases ATAATGAAAAAAACCTTATTAGAATTATTACCTCCTTACCCCCCATACTCGTCAACCTTTTTTAAAGAAATGTTGGTGTT TTATTATTATTAAAAAAACT
Downstream 100 bases:
>100_bases TTACAAGTTTATTTTTTTTTTTAAAATGATAATGATAAATTTTTTTAAATGAGTTTAGAAATATATTGGGAAAAAGCACT AGAACAAACTCAATTATCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 127; Mature: 126
Protein sequence:
>127_residues MTINNQNQLNVLGEEIEICSCAPMTGWFRDGFCNYDKNDGGNHSICCVMDDNFLKYSKSQGNDLITPMPIYSFPGLKDGD HWCICLDRWKQALLDGLAPKVILESTNIVVLESVPLEKLKEYQFNKN
Sequences:
>Translated_127_residues MTINNQNQLNVLGEEIEICSCAPMTGWFRDGFCNYDKNDGGNHSICCVMDDNFLKYSKSQGNDLITPMPIYSFPGLKDGD HWCICLDRWKQALLDGLAPKVILESTNIVVLESVPLEKLKEYQFNKN >Mature_126_residues TINNQNQLNVLGEEIEICSCAPMTGWFRDGFCNYDKNDGGNHSICCVMDDNFLKYSKSQGNDLITPMPIYSFPGLKDGDH WCICLDRWKQALLDGLAPKVILESTNIVVLESVPLEKLKEYQFNKN
Specific function: Unknown
COG id: COG3651
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14425; Mature: 14293
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 8.7 %Cys+Met (Translated Protein) 5.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTINNQNQLNVLGEEIEICSCAPMTGWFRDGFCNYDKNDGGNHSICCVMDDNFLKYSKSQ CCCCCCCCEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEECCCC GNDLITPMPIYSFPGLKDGDHWCICLDRWKQALLDGLAPKVILESTNIVVLESVPLEKLK CCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCEEEEECCCEEEEECCCHHHHH EYQFNKN HHCCCCC >Mature Secondary Structure TINNQNQLNVLGEEIEICSCAPMTGWFRDGFCNYDKNDGGNHSICCVMDDNFLKYSKSQ CCCCCCCEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEECCCC GNDLITPMPIYSFPGLKDGDHWCICLDRWKQALLDGLAPKVILESTNIVVLESVPLEKLK CCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCEEEEECCCEEEEECCCHHHHH EYQFNKN HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA