| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
Click here to switch to the map view.
The map label for this gene is 123968471
Identifier: 123968471
GI number: 123968471
Start: 807026
End: 807289
Strand: Reverse
Name: 123968471
Synonym: A9601_09381
Alternate gene names: NA
Gene position: 807289-807026 (Counterclockwise)
Preceding gene: 123968472
Following gene: 123968468
Centisome position: 48.34
GC content: 29.92
Gene sequence:
>264_bases ATGACCTATTGGGATAAAGATACTATTAAGCTGGTTCAAAGTCTTAATGACAAATTAAAGATTGATCATTCTAAATGGCA TAAAGATAAAGGAAATAAATATAAACGAGCTGCAGAACTAATTTCGGCTGGATTATGCCATTTAATTATTTCTTGCAATG AAAAGGAATCTATTGAGTATATAGAAGAAAGTGTTAAATGGTTAAAAGAAATAAACGTAGATCAACCTTGCCCTAGTAAA AATCACCTTTTTAAAGCCAACTGA
Upstream 100 bases:
>100_bases TATAAATTCTAAAATTGAGGATGTAGGGTTTAAAGATGTAAAATCAAATTCCTTTTTTATGACCAAAGTATGGTCTGCTG TAAAGTAAAAAAAAACTCCT
Downstream 100 bases:
>100_bases AGCCTATTACCTTTACTACTCCATCTAATATCATCAAAACATTCATTAATAATGTATAGGCCACGCCCATTTACACTATT TATTTTTTTTGGTAATGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 87; Mature: 86
Protein sequence:
>87_residues MTYWDKDTIKLVQSLNDKLKIDHSKWHKDKGNKYKRAAELISAGLCHLIISCNEKESIEYIEESVKWLKEINVDQPCPSK NHLFKAN
Sequences:
>Translated_87_residues MTYWDKDTIKLVQSLNDKLKIDHSKWHKDKGNKYKRAAELISAGLCHLIISCNEKESIEYIEESVKWLKEINVDQPCPSK NHLFKAN >Mature_86_residues TYWDKDTIKLVQSLNDKLKIDHSKWHKDKGNKYKRAAELISAGLCHLIISCNEKESIEYIEESVKWLKEINVDQPCPSKN HLFKAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10201; Mature: 10070
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYWDKDTIKLVQSLNDKLKIDHSKWHKDKGNKYKRAAELISAGLCHLIISCNEKESIEY CCCCCHHHHHHHHHHHHHEECCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH IEESVKWLKEINVDQPCPSKNHLFKAN HHHHHHHHHHCCCCCCCCCCCCCEECC >Mature Secondary Structure TYWDKDTIKLVQSLNDKLKIDHSKWHKDKGNKYKRAAELISAGLCHLIISCNEKESIEY CCCCHHHHHHHHHHHHHEECCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH IEESVKWLKEINVDQPCPSKNHLFKAN HHHHHHHHHHCCCCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA